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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Harore.CG.MTP2014.S3...' > 
  4. Transcript 'Harore.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S7.g12857.03.t

Possible name(s)

SRBD1; SUPT6H

Gene model

Harore.CG.MTP2014.S7.g12857

Location

S7 [606,923 / 610,705]

Sequences

Amino acid sequence

Length: 435

>Harore.CG.MTP2014.S7.g12857.03.p
METKGEPSSSDHNKEQCRQESTHNHVAYGETGFKKNKGVINTQTYQHDTRFYFAMSGVFI
DDEADETSDEEFEVPKKKRIVSDPENSGSDDDAEDEEEVDKQLAAEADDRGNIRDLIDDD
IVEDEEEESNGSDSNATSDSDTVEREKEREKEKAKRHKRKYDHRLEDDDLDLIEENLGVK
IKRKKFSRLKTVSSDEDDSDKEENNNDGADRDNVANEIFQGNVYDDAPPAMRAEPVMPVL
DEEEEGSDESDVDDFIVDDNGEPINRPQGQKRRKGDTALQNLQDIFGIDFDFNEFEKYGD
QYGDEEGMEDEEDYYDDDEDGAIVDAELRVKKKSKKIKKKKSIFDVYEPDTLEKGFFTDF
DADIRNADVPERFQLRTIPVRISACEDLEGRCSDCISCHHMSYDSWYYEHARLKVQLLHD
MPFVAGLINLRFKVT

Nucleotide sequence

Length: 1,308

>Harore.CG.MTP2014.S7.g12857.03.t
ATGGAAACAAAGGGCGAGCCATCATCATCAGATCATAATAAAGAACAATGTAGGCAAGAA
TCAACTCACAATCACGTGGCCTATGGTGAAACTGGCTTTAAAAAGAATAAAGGAGTAATC
AACACACAAACATACCAACACGATACTAGATTCTATTTCGCCATGTCCGGTGTTTTCATC
GATGACGAAGCAGATGAAACATCAGATGAAGAATTTGAAGTTCCTAAGAAGAAACGTATC
GTAAGTGACCCTGAAAATAGCGGATCTGATGATGATGCAGAGGATGAAGAAGAGGTTGAC
AAGCAACTTGCTGCTGAAGCTGATGACCGAGGCAATATTCGGGATCTGATAGACGATGAC
ATTGTTGAGGATGAAGAAGAGGAAAGTAATGGCAGTGATTCCAATGCAACTAGCGATTCA
GATACTGTAGAGAGGGAGAAAGAGAGGGAAAAAGAAAAAGCTAAACGTCATAAGCGAAAA
TATGACCACAGATTGGAAGATGACGATTTAGATTTAATTGAAGAAAATTTGGGTGTCAAG
ATAAAGAGGAAGAAGTTCAGTCGCTTGAAAACCGTCTCCTCGGACGAGGATGACAGCGAC
AAAGAGGAAAACAACAACGATGGTGCTGATCGAGATAATGTTGCTAATGAAATATTTCAA
GGAAATGTTTATGATGACGCACCTCCAGCAATGCGTGCGGAACCTGTGATGCCTGTATTG
GATGAAGAAGAGGAAGGTTCGGACGAAAGCGATGTAGATGATTTTATTGTGGACGATAAC
GGTGAGCCCATCAACAGGCCGCAAGGTCAAAAGCGGAGGAAGGGTGACACAGCGTTGCAA
AATCTTCAGGACATATTTGGCATTGACTTTGACTTCAATGAGTTTGAAAAGTATGGAGAC
CAATACGGGGACGAGGAGGGAATGGAGGATGAAGAAGATTATTATGATGATGACGAAGAT
GGGGCAATAGTAGATGCAGAGCTGCGTGTGAAGAAAAAAAGCAAGAAAATCAAAAAGAAG
AAATCGATATTTGATGTTTATGAACCAGACACTTTGGAAAAAGGCTTTTTCACAGACTTT
GATGCTGATATTCGTAATGCTGATGTTCCTGAAAGATTTCAATTACGGACTATTCCCGTC
AGAATAAGTGCATGTGAAGATCTTGAAGGCCGCTGTAGTGATTGTATATCTTGCCACCAT
ATGTCATATGATTCATGGTATTATGAGCATGCAAGATTGAAAGTACAGCTATTGCACGAT
ATGCCTTTTGTTGCTGGTCTTATCAATCTGAGATTCAAGGTCACCTAA

InterProScan

PANTHER
TF_Spt6 (IPR017072) - T[55-383] 6.1E-31
Pfam
Spt6_acidic_N_dom (IPR028083) - T[95-194] 3.9E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPT6H_HUMAN 44.601 % 100 2.55E-22