- Clone 'cien231237' >
- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S81.g12141.01.t
Possible name(s)
EFS; PEX13; SH3D19
Gene model
Location
S81 [18,174 / 21,572]
Amino acid sequence
Length: 344
>Harore.CG.MTP2014.S81.g12141.01.p
MSDLPPPKPWEINRSSSSANIYGPLHSGTSNTVNDSRPTAIPPPVPARPSQRVNTPPNYQ
SNYGSFGSYPSYGGGYSGMYGGGMYGGMYGNSMNGYNRPYSNTGGFSRQAEDSTRQAFQS
VESIVRAFTSVSAMLESTLGAVYSSFRAVLDVADHFSRVKATFTDILSSITLFRLVRFLY
RRARAFLNLTPCDDAWDTANAENAAKFTQRRKSRSWPILLFISVVIGGPYLIWKLLSGAQ
NSAPKPKMKWANGEADHVVARAEYSFESENDDELSFRVGDVLHLAPKEQQSSIRDWLLAS
VDGEKVGMVPANYVKILGKRKGRSVEDNISNLADQGSQVQLTTD
Nucleotide sequence
Length: 2,038
>Harore.CG.MTP2014.S81.g12141.01.t
ATGTTGCTCCATATCCAACAGACGCAATTTAAGTTAATAAATATCAACATGAGACCACTG
ACAGAAGAAGAAACAAGAACCCTATTTGATAAATTAACAAAATACATTGGTGAAAACTTG
AAGCTGCTTATAGACAGACCAGATGGCTTGTACTGCTTTCGACTGCACAGAGAACGTGTG
TACTATGTCTCGGAAGACATCATGAAACGGGCAATGAATGTTTGTCGCGAGAACCTGATA
AGCTTCGGAGTTTGTTTCGGGAAATTCACAAAAACTAGAAAGTTTCGGCTTCATATAACT
GCGCTAGATTATTTAGCACCTTATGCAAAGTACAAGATGTGGGTCAAGCCAGGAGCAGAA
CAATCCTTTTTATATGGGAACCACATCCTGAAATCAGGCCTTGGAAGAATTACAGAAGGA
ACTCTCAAATACCAAGGAATTGTATTGTATTCAATGAATGACACTCCTTTGGGATTTGGG
GTAGCCGCCAAGTCCACAGCAGAGTGCAGGCATGCAGATCCTATGTCTATTGTTGCGTTT
CATCAAGCGGATGTTGGAGAATATCTTAGGAAAGAAGATACTTTGATATGAGAATGGGAA
TGAAGGATGGTCACTGGAAAACAAACTTAGCAGCGTGTGAATAGTTTTGCATTAACATCT
GCATGATCAACTTGAGATATACATACACTACAGTCCCTACAAATTATGTGATGTGGATGG
AATTGGTGATACAAAATAAAAATTCGTATTGCGCAATCAAGTAAATCGAGTCTTAGGTAA
TGTAAGATCAAAGAAGACATAAAAGAATAAAAACAGCTTGCAAATTATTAGGCAGACAAA
TCTTCTGTAACTATGACAATATTGCAGTTTCACCTTGCATCAATGGAATAAGATGCATCT
CATTGTCAGTCAGTAGTCAATTGCACTTGGCTTCCTTGATCTGCTAAGTTACTGATGTTA
TCTTCGACAGACCTTCCCTTTCTTTTTCCTAAAATTTTAACATAGTTTGCCGGCACCATA
CCAACTTTTTCTCCGTCGACAGACGCCAGCAACCAATCTCGAATTGAAGATTGTTGCTCT
TTCGGTGCGAGGTGGAGTACGTCACCCACCCGAAAAGAAAGCTCATCATCATTTTCAGAT
TCGAAGCTGTATTCCGCTCTTGCCACAACATGGTCTGCTTCTCCATTGGCCCACTTCATT
TTTGGTTTGGGTGCAGAATTTTGAGCTCCACTAAGCAACTTCCATATTAGGTAAGGACCT
CCGATTACAACAGATATAAACAGTAAGATGGGCCATGACCTAGATTTTCTTCTTTGAGTA
AATTTAGCAGCATTTTCAGCGTTGGCCGTGTCCCAGGCGTCATCGCACGGAGTTAGGTTT
AGAAATGCTCTGGCACGGCGGTAGAGGAATCTTACCAAACGAAATAGAGTTATGGAAGAT
AGAATGTCTGTGAATGTTGCTTTGACTCTTGAAAAATGATCAGCGACATCTAAAACAGCT
CTGAATGAACTGTAAACAGCACCAAGAGTAGATTCCAGCATTGCTGATACCGATGTGAAT
GCCCTCACGATGCTCTCAACAGACTGAAATGCTTGTCTGGTGCTGTCTTCAGCTTGCCTA
GAAAAGCCCCCGGTATTGGAATAAGGTCTGTTGTATCCGTTCATACTGTTACCGTACATC
CCTCCATACATCCCTCCTCCATACATGCCACTGTACCCACCACCGTAACTCGGATAACTC
CCGAAACTTCCATAGTTCGATTGGTAGTTCGGTGGGGTATTCACTCGTTGAGAGGGTCTG
GCTGGAACCGGAGGGGGGATCGCAGTGGGTCTTGAATCGTTAACAGTGTTACTTGTTCCG
GAATGAAGGGGTCCATAGATGTTAGCAGAACTAGAACTCCTGTTGATTTCCCATGGCTTA
GGTGGGGGTAAATCAGACATTTTGAGACGATAATAAAAAGCGGAATACTAAAACCCACTA
TACCTTGGGCCAGTTACCTATTCTTCCTTGGTATTTCGTAACTGAAATGAAAATACCT
| PANTHER |
Pex13 (IPR035463) - T[3-326] 2.6E-87 |
| Pfam |
Peroxin-13_N (IPR007223) - T[106-236] 1.2E-38 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[246-321] 8.27E-17 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[255-319] 13.286 |
| SMART |
SH3_domain (IPR001452) - T[258-318] 2.0E-14 |
| PRINTS |
SH3_domain (IPR001452) - T[258-268] 7.5E-6 - T[272-287] 7.5E-6 - T[305-317] 7.5E-6 |
| Pfam |
SH3_domain (IPR001452) - T[262-315] 6.9E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PEX13_HUMAN | 49.498 % | 273 | 2.08E-89 |