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TRANSCRIPT CARD

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  1. Clone 'cima822782' > 
  2. Clone 'cien45153' > 
  3. Transcript 'Cisavi.CG.ENS81.R44....' > 
  4. Transcript 'Harore.CG.MTP2014.S4...' > 
  5. Transcript 'Harore.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S81.g15688.01.t

Possible name(s)

FGF16; FGF20; FGF9

Gene model

Harore.CG.MTP2014.S81.g15688

Location

S81 [86,239 / 87,945]

Sequences

Amino acid sequence

Length: 369

>Harore.CG.MTP2014.S81.g15688.01.p
MPSVQMVPGSTVDVSATTTGPTSATGALASFLVAAILRAKKMTFKPTTTREHTAKDLTWS
GSRIPVNELDKLPISAEATQYQNTRSRILSIRSKTRRPTDVRSLSDDNSIPQRLTDSTVP
IVHDRLPDPKLWEKLNFGTEVEVDDDTLTDLSPQTEEDSSYSLPESSSTHKITKRSISAG
LEGIMRRRQLYCRNGYHLQILPRGQVMGTRKDHSRYGSGCPLDRLSDLSQYDTQISVRHF
LKALRRTKQYYFVSIAILEFVSVNVGVVTIRGVETGLYLAMDSKGRLYGSEKLSRNCLFK
ETFEENKYNTYSSLRHRNHSDTRSCFVAISQQGRARSGCRSKESQKFTHFLPRLVDPRRV
PWHYEGEMY

Nucleotide sequence

Length: 1,110

>Harore.CG.MTP2014.S81.g15688.01.t
ATGCCTTCAGTACAAATGGTACCGGGTTCCACAGTGGATGTTTCAGCTACTACAACGGGA
CCCACATCGGCTACGGGAGCATTAGCTTCTTTCCTAGTCGCGGCGATACTCCGAGCCAAG
AAAATGACTTTCAAGCCTACGACGACTAGAGAACATACAGCCAAAGATTTAACGTGGAGC
GGTTCTCGCATACCAGTAAATGAACTCGACAAACTGCCTATTTCGGCAGAAGCAACGCAA
TATCAGAACACCAGAAGCAGAATTTTATCTATACGTAGTAAAACAAGAAGACCTACAGAT
GTGAGAAGCTTGTCTGATGATAATTCTATACCACAAAGACTCACCGACTCAACAGTACCG
ATAGTACATGACCGTCTTCCCGACCCAAAATTATGGGAAAAACTTAACTTCGGGACCGAG
GTCGAAGTCGACGACGATACGCTTACGGATTTATCGCCACAGACCGAAGAAGACTCGAGC
TACTCTTTACCGGAGAGTAGCAGTACACATAAAATCACGAAAAGAAGTATATCTGCTGGA
TTGGAGGGAATAATGAGAAGAAGACAATTGTATTGCCGAAATGGATATCATTTACAAATT
CTTCCTAGAGGTCAAGTGATGGGTACAAGAAAAGATCATAGCAGATATGGCTCAGGATGC
CCGCTGGATAGACTATCCGATTTGTCACAATATGATACCCAAATTAGCGTTAGGCACTTT
CTCAAAGCCCTCAGAAGAACTAAACAATATTATTTTGTCTCTATAGCAATCCTCGAATTT
GTGTCGGTCAATGTCGGGGTCGTGACAATACGAGGCGTGGAAACAGGGCTATATCTAGCA
ATGGACAGCAAAGGACGACTTTATGGTTCGGAAAAATTAAGCAGAAACTGCCTTTTTAAA
GAGACCTTCGAGGAAAACAAATACAATACTTATTCTTCGCTAAGACATCGTAATCATTCA
GACACAAGATCTTGCTTCGTCGCCATAAGCCAACAGGGACGTGCGAGATCAGGATGCCGT
TCTAAAGAATCCCAAAAGTTCACACACTTTCTACCGAGACTGGTCGACCCAAGAAGAGTT
CCCTGGCACTACGAAGGCGAAATGTATTAA

InterProScan

SUPERFAMILY
IL1/FGF (IPR008996) - T[174-216] 1.01E-42 - T[256-355] 1.01E-42
PANTHER
Fibroblast_GF_fam (IPR002209) - T[179-217] 2.3E-60 - T[253-364] 2.3E-60
PANTHER
FGF20 (IPR028291) - T[179-217] 2.3E-60 - T[253-364] 2.3E-60
SMART
Fibroblast_GF_fam (IPR002209) - T[184-354] 1.7E-41
Pfam
Fibroblast_GF_fam (IPR002209) - T[186-216] 1.6E-6 - T[255-351] 1.3E-31
CDD
Fibroblast_GF_fam (IPR002209) - T[188-354] 2.53668E-45
ProSitePatterns
Fibroblast_GF_fam (IPR002209) - T[285-308] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FGF16_HUMAN 45.902 % 171 8.21E-52
FGF9_HUMAN 47.568 % 176 6.65E-54
FGF20_HUMAN 50.267 % 179 4.06E-55