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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Molecular Tool 'Cytochalasin' > 
  3. Clone 'cima876887' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  5. Transcript 'Harore.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S831.g04134.01.t

Possible name(s)

IPO13; XPO1; XPO5

Gene model

Harore.CG.MTP2014.S831.g04134

Location

S831 [11,979 / 21,073]

Sequences

Amino acid sequence

Length: 826

>Harore.CG.MTP2014.S831.g04134.01.p
MLSPGHMTPPIGASMGSVTQQVGEQLLDFSQKLDITLLDNVVGCLYNGSGQQQRIAEEIL
TALKEHPDAWTRVDTILEFSQNQQTKYYALQILENVIKTRWKVLPRNQCEGIKKYIVALI
IKTSSDPNLVEKEKTYLGKLNVILVQILKQDWPKNWPTFISDIVGASRTNESLCQNNMII
LKLLSEEVFDFSQGQMTQAKAKHLKDSMCNEFAQVFQLCQFVMDNSQNAPLVNATLNTLL
LFLNWIPLGYIFETELITQLVYKFLGLPMFRNITLKCLTEIAGVNVEKYEEEFTKLYSLT
MNQLKQMLPTTINMKAAYASGSNDDQNFIQNLALFLCIFFKEHVSLIEKKSELHPMLLDG
LEYLVLISEVEETEIFKICLEYWNQLAADLYRESPFTAGATIPLSGNDSNVPLRRQIYLP
LLSKVRLVMISRMAKPEEVLVVENEQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYMD
TERIMTEKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIRDLLGLCEQK
RGKDNKAIIASNIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHETHDGVQDMACDTFIKI
AQKCRRHFVQIQAGEVMPFIEEILNNISTIICDLQPQQVHTFYEAVGYMISAQTDTNVQE
HLIEKYMMLPNQVWDSIIQQATKNVDVLKDPATVKQLGSILKTNVRACKSVGHYFVLQLG
RIYLDMLNVYKCLSENISAAIKQQGEGVMKQPLIRSMRTVKKETLKLISGWVSRSNDPDM
VNENFIPPLLEAVLMDYQSNVPAAREPEVLSTIATIVHKLEVRYNI

Nucleotide sequence

Length: 3,087

>Harore.CG.MTP2014.S831.g04134.01.t
CGCGAGTTATTCCGAAAAAATGCGAACGGTTTATACGCGCAAAACCAGCGCAAACCGGTT
CGGGTGATGTCTGATAATTTATACAGCGAATTGAAATCCATGAATACATTTCAGAATTTG
TTGTGCGAGACGCACGGCAGTAAAGGAGGTCGAAAAAAGCTATATAAATTTGCAAACGAA
GCAGTATCTTAGATTGTCGCTAGATAATATCTGTAGTTAGAACTTGGGAACCTTTCGCCA
AGCACTGCAATTCTCCCGCCTATTTTTGAATACCAAAGTATCAACTACACCATCAAAACG
GCTACTTCTACTCTCTGCGCTAAGGTCGTTCAATCGGGGTGGCTTTCTGGTGATAGATAT
TAATTTTGCAAGAAGTATTTGTAAACATAATAAAAGAGTACTTTGTTATGCCCATCACTT
GCATTTAGTGGTGAGGTCCCTCCAGTAGCCCGCTTAGGTTAGGATGTTGCGTCTTATGTA
TTTGTTATTTTACGCTGTGTTGCGTAGATACTACAAATCACTCCCTCTAACAAAGGAGGA
AACTCTGTTATCGTTGTCCAGTAATCAGTAGGTAACAAAAACAAAACCTTATACTTCGAT
TAAACGATGCTGTCGCCTGGACACATGACCCCACCCATAGGAGCGAGCATGGGAAGTGTC
ACCCAACAAGTTGGCGAGCAACTTCTTGATTTTTCACAGAAACTCGACATAACACTTTTG
GACAATGTCGTCGGTTGTTTATATAATGGTTCCGGACAACAGCAACGTATTGCGGAAGAA
ATCTTGACAGCATTGAAGGAACATCCGGATGCATGGACGAGAGTCGACACCATTCTCGAA
TTCTCGCAGAACCAACAGACCAAGTATTACGCTCTTCAAATACTTGAGAATGTCATCAAG
ACTCGATGGAAAGTGCTGCCAAGAAATCAATGCGAAGGAATTAAGAAATATATCGTTGCA
TTGATCATCAAAACTTCGTCCGATCCAAACCTGGTCGAAAAAGAGAAAACTTATCTCGGA
AAACTTAATGTCATTCTTGTTCAAATTCTGAAGCAGGATTGGCCGAAGAACTGGCCGACA
TTCATCAGTGATATTGTTGGTGCAAGTCGTACGAATGAAAGCCTTTGTCAGAATAACATG
ATTATTCTCAAATTGCTCAGTGAAGAAGTTTTCGATTTCTCTCAAGGACAAATGACGCAA
GCAAAAGCTAAACATCTGAAGGACAGTATGTGTAATGAATTCGCTCAAGTATTTCAGCTA
TGTCAGTTTGTTATGGATAATTCTCAGAATGCACCGCTTGTGAACGCAACATTGAACACT
TTGCTTCTATTTCTTAACTGGATTCCACTTGGATACATATTCGAAACCGAGCTCATCACA
CAGCTTGTATATAAGTTTCTCGGTCTGCCAATGTTCAGGAACATCACATTGAAATGCTTA
ACTGAGATTGCCGGTGTAAATGTCGAAAAGTACGAAGAAGAATTTACAAAGCTTTATTCG
CTCACAATGAATCAATTGAAACAGATGCTTCCAACCACCATCAATATGAAAGCAGCTTAT
GCAAGTGGAAGCAACGATGATCAGAATTTCATCCAGAATCTTGCTCTATTTCTCTGCATC
TTCTTCAAAGAACATGTTTCCCTGATCGAGAAGAAATCAGAACTTCATCCGATGCTTCTT
GATGGTCTCGAATATCTTGTCTTGATTTCGGAAGTTGAGGAAACAGAAATATTCAAGATT
TGTTTGGAATATTGGAATCAGCTCGCTGCCGATTTGTATCGTGAAAGTCCGTTCACCGCG
GGAGCAACAATTCCGTTGTCTGGAAACGATTCGAATGTTCCGCTGAGACGACAAATATAT
CTTCCATTGCTTTCAAAGGTTCGTCTCGTAATGATCAGTCGAATGGCAAAACCAGAAGAA
GTTCTTGTTGTTGAGAATGAGCAGGGAGAAGTAGTTCGAGAATTTATGAAAGACACAGAT
TCAATTAATCTGTACAAAAATATGAGAGAAACCCTGGTTTATCTCACTCATTTGGATTAC
ATGGACACTGAACGCATCATGACAGAAAAACTTCACAATCAAGTGAACGGAACAGAATGG
TCATGGAAAAATTTAAATACTCTATGCTGGGCGATCGGAAGCATCAGTGGTGCAATGCAC
GAAGAAGATGAGAAAAGATTTCTTGTAACTGTGATAAGAGATCTTCTTGGACTTTGTGAA
CAGAAGCGAGGCAAAGATAACAAAGCGATTATTGCTTCAAACATCATGTATGTTGTCGGA
CAATATCCAAGATTTCTCAGAGCTCACTGGAGATTCCTGAAAACAGTTGTCAATAAATTG
TTTGAGTTTATGCACGAGACACACGATGGCGTGCAAGATATGGCTTGCGACACATTCATA
AAAATCGCTCAGAAATGCAGACGTCATTTTGTGCAGATACAAGCCGGGGAGGTGATGCCG
TTTATTGAGGAAATCTTGAATAACATAAGCACGATTATATGCGATCTACAACCACAGCAG
GTTCATACATTCTATGAAGCGGTTGGATACATGATCAGTGCACAAACAGATACAAATGTC
CAAGAACATTTGATTGAGAAATACATGATGTTACCGAACCAAGTATGGGATAGTATCATA
CAACAAGCAACGAAAAACGTCGATGTATTGAAAGATCCAGCGACCGTCAAACAACTAGGA
AGTATTTTGAAAACAAATGTGAGAGCGTGCAAAAGTGTCGGACATTACTTCGTACTACAG
CTCGGACGAATCTATCTTGATATGCTGAACGTTTACAAATGTTTGAGTGAGAATATCTCT
GCTGCCATCAAGCAGCAAGGTGAAGGAGTAATGAAACAACCTTTGATACGGAGCATGAGA
ACAGTAAAGAAAGAAACATTAAAACTTATCTCAGGATGGGTTAGTCGATCAAATGATCCT
GATATGGTGAACGAGAATTTCATTCCACCTCTGCTTGAAGCTGTGTTGATGGATTATCAG
TCGAATGTGCCGGCAGCTCGTGAACCGGAAGTTTTAAGTACAATAGCAACAATAGTTCAT
AAGTTAGAGGTAAGATATAATATATAA

InterProScan

Gene3D
ARM-like (IPR011989) - T[11-826] 0.0
SUPERFAMILY
ARM-type_fold (IPR016024) - T[38-288] 3.66E-98 - T[353-679] 3.66E-98 - T[754-821] 3.66E-98
ProSiteProfiles
Importin-beta_N (IPR001494) - T[56-122] 15.072
SMART
Importin-beta_N (IPR001494) - T[56-122] 1.3E-12
Pfam
Importin-beta_N (IPR001494) - T[56-121] 4.9E-13
Pfam
Exportin-1/Importin-b-like (IPR013598) - T[135-278] 3.8E-40
Pfam
CRM1_C_dom (IPR014877) - T[718-822] 1.8E-36
SMART
CRM1_C_dom (IPR014877) - T[718-826] 5.0E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
XPO1_HUMAN 82.447 % 1417 0