- Clone 'citb085f21' >
- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S842.g10471.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S842 [1,784 / 4,418]
Amino acid sequence
Length: 184
>Harore.CG.MTP2014.S842.g10471.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIAD
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVH
RKCF
Nucleotide sequence
Length: 555
>Harore.CG.MTP2014.S842.g10471.01.t
ATGTCTGATGGTGAAGAAGATACAACCGCAATCGTCTGCGACAATGGATCAGGATTGGTC
AAGTCTGGCTTTGCTGGTGATGACGCACCACGAGCAGTTTTTCCGTCAATCGTTGGTCGT
CCAAGACATCAAGGTGTCATGGTCGGTATGGGACAGAAGGACAGCTACGTAGGAGATGAG
GCTCAAAGCAAAAGAGGAATCCTCACTTTGAAATATCCCATTGAACATGGTATGGAATCA
GCTGGTATTCATGAAACCACGTACAATTCCATCATGAAATGCGATATTGACATCCGTAAG
GATCTTTACGCTAACAACGTTCTCTCTGGTGGAACCACCATGTATCCTGGTATTGCTGAT
CGTATGCAAAAAGAAATCACTGCTCTTGCTCCGAGTACCATGAAGATCAAAATCATTGCT
CCTCCTGAACGTAAATATTCTGTCTGGATTGGAGGATCGATTCTTGCTTCCCTCTCCACC
TTCCAACAGATGTGGATTAGCAAACAAGAATACGATGAAGCCGGACCATCCATTGTTCAT
AGAAAATGTTTCTAA
| PANTHER |
Actin (IPR004000) - T[5-78] 4.9E-117 - T[77-183] 4.9E-117 |
| Pfam |
Actin (IPR004000) - T[6-78] 1.0E-17 - T[80-184] 5.6E-46 |
| SMART |
Actin (IPR004000) - T[8-184] 2.4E-16 |
| PRINTS |
Actin (IPR004000) - T[29-38] 2.5E-15 - T[52-63] 2.5E-15 - T[64-86] 2.5E-15 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[165-173] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 95.69 % | 229 | 4.87E-75 |
| ACTS_HUMAN | 93.966 % | 228 | 2.06E-74 |
| ACTC_HUMAN | 95.69 % | 229 | 3.96E-75 |