Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S847.g13302.01.t

Possible name(s)

PCYOX1; PCYOX1L

Gene model

Harore.CG.MTP2014.S847.g13302

Location

S847 [13,748 / 18,456]

Sequences

Amino acid sequence

Length: 584

>Harore.CG.MTP2014.S847.g13302.01.p
KISFAVYSFECRMLKLSFALALLTYFLTTFCNADSKPNPARIAVIGGGIGGMSSIYFLKE
KFGKDVPIDLYEPKSTLCGRVATVNVNGRDYESGASIIHPKNMHMKNFVESFGLKHAANV
DGITALFDGKDYILKTSTWSVLTFLKMLWLYGLDLFRINRLESHFMEKFLSIYDLQEQGY
SYNDVESLLRAAADEEFLNATKVSIRKLYSDNGIHSTMIDTLVTGAIRNNYGQDATTTHG
FVGSVSMAGIEPGLWSVYGGNKMVCEKIFEATEPNLIHEHVSSVTYRPESAHEAFSITTV
ENPKTTHKYDIVILAAPIGPNTYNIDLSKACEEFLPCPVADAKDMAYRQTVANFIVGKLN
SSLFHCDSKQECPEDIFVPNTTLFYRSISGKFPVDYDPKIDTEDVMIYKVYTTEPMTKEQ
ISYLFDSYNETTYVKWNAYPDYHVPQKLSSFVLNRAGLYYTSPIEWAASAMEMSAVSGKN
AVLLAYNYWFGLKVKMNKIVYENGARNEFFVVLNALYTILTCNSTSPNSISQFSLKVIIP
FSGYFSNPAGFWCNKTFGRCIEVNVKNLFKFLYPDELDNVSLNE

Nucleotide sequence

Length: 1,772

>Harore.CG.MTP2014.S847.g13302.01.t
AAGATTTCGTTTGCTGTATATAGTTTTGAATGTAGGATGTTGAAGTTATCGTTTGCACTC
GCTCTGTTGACTTATTTTCTGACGACATTTTGCAATGCAGATTCGAAACCAAACCCAGCA
AGAATTGCTGTCATCGGAGGAGGCATTGGTGGAATGTCATCAATATATTTCTTGAAGGAA
AAATTTGGCAAAGACGTCCCGATTGATTTGTACGAGCCGAAGTCAACGTTGTGCGGAAGA
GTGGCGACCGTTAATGTCAATGGACGAGATTATGAAAGTGGAGCTTCGATTATCCATCCT
AAAAACATGCACATGAAGAATTTTGTGGAGTCATTTGGTTTGAAACATGCAGCTAATGTT
GATGGTATCACAGCATTATTTGACGGCAAAGATTACATTTTAAAAACAAGTACCTGGTCG
GTATTAACCTTCCTCAAGATGCTATGGCTTTATGGACTTGATCTATTCCGAATTAACAGA
TTGGAAAGTCATTTCATGGAGAAATTTTTATCAATTTATGATCTACAAGAGCAAGGATAC
AGCTACAACGATGTGGAAAGTCTCTTGCGAGCCGCTGCTGATGAAGAGTTCTTAAATGCG
ACCAAGGTCTCCATCAGGAAACTGTATTCTGATAATGGAATTCATTCTACAATGATTGAC
ACTTTAGTAACTGGAGCAATAAGAAATAATTATGGACAAGATGCAACAACAACACATGGA
TTTGTTGGATCAGTATCAATGGCTGGAATTGAGCCCGGGCTGTGGTCTGTTTACGGAGGA
AACAAGATGGTTTGCGAGAAAATATTCGAAGCAACCGAACCGAATCTCATTCATGAACAT
GTGTCCTCTGTAACATATAGACCTGAAAGTGCACATGAGGCGTTCTCCATAACTACTGTC
GAAAACCCGAAAACAACTCATAAATATGACATTGTGATACTAGCTGCTCCTATTGGACCT
AACACGTACAACATTGACTTGTCAAAAGCTTGTGAAGAATTTCTACCTTGCCCTGTTGCA
GATGCGAAAGATATGGCATACAGACAAACTGTTGCAAACTTCATTGTTGGGAAACTGAAT
TCTTCATTGTTCCATTGCGATTCAAAGCAGGAATGTCCTGAAGATATTTTCGTTCCGAAT
ACAACCCTGTTTTACCGGTCCATTAGCGGAAAATTTCCAGTCGATTACGATCCGAAAATA
GATACTGAAGATGTCATGATATACAAAGTATATACAACTGAGCCAATGACAAAGGAACAG
ATTTCTTATTTGTTCGATTCTTACAATGAGACAACATATGTGAAATGGAATGCATATCCA
GATTATCACGTTCCCCAAAAGCTGTCATCGTTTGTACTGAACAGAGCTGGTTTGTACTAC
ACAAGTCCTATTGAATGGGCTGCAAGTGCTATGGAGATGTCGGCTGTATCCGGTAAAAAT
GCAGTCTTGCTTGCCTACAACTATTGGTTTGGTCTGAAGGTGAAAATGAATAAAATTGTT
TATGAAAATGGAGCAAGAAATGAGTTCTTTGTAGTGCTTAATGCACTATATACTATACTA
ACATGTAACTCTACATCTCCGAATTCGATCAGTCAATTTTCACTGAAAGTAATAATTCCG
TTTTCTGGATATTTTTCGAATCCAGCTGGATTTTGGTGCAATAAAACGTTTGGCCGTTGT
ATAGAAGTAAATGTTAAAAATTTGTTTAAATTCCTATATCCTGATGAACTAGATAATGTC
TCCCTGAACGAATAAAAAAGACGAGAGTTTCA

InterProScan

PANTHER	Prenylcysteine_Oxase (IPR017046) - T[27-496] 6.8E-148
Gene3D	FAD/NAD-bd_sf (IPR036188) - T[36-148] 5.2E-13
SUPERFAMILY	FAD/NAD-bd_sf (IPR036188) - T[37-337] 2.91E-17
Pfam	Prenylcys_lyase (IPR010795) - T[135-491] 7.9E-94

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PCYOX_HUMAN	34.49 %	265	7.03E-82
PCYXL_HUMAN	34.505 %	283	6.81E-89