Aniseed - Transcript Card

Transcript 'Harore.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S84.g13575.01.t

Possible name(s)

CEPT1; CHPT1; SELENOI

Gene model

Harore.CG.MTP2014.S84.g13575

Location

S84 [86,888 / 92,191]

Sequences

Amino acid sequence

Length: 435

>Harore.CG.MTP2014.S84.g13575.01.p
MGDNIFLTSCHVSAFVLYVIILLGISYFCTDINNGCSFYFVCSPESTIMYVTEDQLKGFD
SYKYSCIDTSPLSNYVMHPFWNQFVKIFPKWVAPNVMTFGGFLLLVMLSIVLFIYDPYLY
ASNAELTKYAAVPTWVWWFSCFTQFFSHTLDGLDGKQARRTGSSSPLGELFDHGLDSWCV
SMFTVAIFSVFGRGEYGATVWEFYMAYWVMLSCFVLSHFEKYNTGVLYLPWSYDASQVLM
ALAYLLAAVFGTEVYSIDIGDKPLGFYLKLVIIYGSLPVSSAVSLYNVYRSYAGKTGKMR
TFYEATIPLFSPIITFILITTWCSLSPYGILHKQPRWVFLASSVVFSNIVCRLVVSQMSN
TRCQVFNFMLLPLAISLAASLYMSDPLIEFWIFRIMTVFLTLLHIHYGVTVVNELADHFG
IRVFLIRKPEQKHED

Nucleotide sequence

Length: 1,644

>Harore.CG.MTP2014.S84.g13575.01.t
ATGGGCGATAATATATTTTTAACGAGTTGCCATGTTTCTGCGTTTGTTTTATATGTTATA
ATACTTCTTGGGATATCGTATTTTTGTACGGACATTAATAACGGTTGTTCATTTTATTTC
GTGTGTTCGCCAGAGAGTACCATCATGTATGTCACAGAAGACCAATTGAAAGGATTTGAC
AGCTATAAATATAGCTGTATCGACACTTCACCACTCTCAAACTATGTGATGCACCCGTTT
TGGAATCAGTTTGTCAAAATATTTCCGAAATGGGTTGCCCCGAATGTCATGACGTTTGGT
GGTTTTCTGCTTCTTGTCATGTTATCCATTGTTTTATTTATATATGACCCGTATCTGTAT
GCTTCCAATGCCGAACTGACGAAATATGCAGCGGTTCCCACCTGGGTCTGGTGGTTTAGT
TGTTTCACTCAGTTTTTTTCACACACTCTGGATGGCTTGGATGGCAAACAAGCCAGGCGT
ACTGGATCATCGTCGCCACTCGGTGAGTTGTTTGACCACGGTTTAGATTCCTGGTGCGTG
TCCATGTTCACCGTCGCGATTTTCTCGGTATTTGGTCGAGGAGAGTATGGGGCAACAGTG
TGGGAATTCTATATGGCATATTGGGTTATGCTGTCCTGTTTCGTACTATCTCACTTTGAA
AAATACAATACTGGAGTACTCTACTTACCCTGGAGTTATGATGCCAGTCAAGTCCTCATG
GCATTAGCATATTTATTAGCTGCTGTTTTTGGTACTGAAGTTTATTCGATCGACATTGGT
GATAAACCGCTTGGTTTCTACCTTAAGCTGGTGATCATCTATGGTTCTCTGCCAGTATCT
TCAGCTGTCTCACTGTACAATGTGTACCGATCGTACGCTGGTAAAACAGGAAAAATGAGA
ACATTTTATGAAGCAACGATTCCTCTGTTTTCACCCATTATCACGTTTATCTTAATAACA
ACCTGGTGTTCACTATCTCCTTATGGAATTCTGCACAAGCAACCTCGTTGGGTGTTCCTG
GCTTCAAGTGTAGTGTTCTCCAATATTGTATGCCGGCTCGTTGTTAGCCAAATGTCCAAC
ACTAGATGTCAGGTGTTCAATTTCATGCTGCTGCCATTGGCCATATCTCTTGCTGCCAGT
CTATACATGAGTGACCCATTGATTGAGTTCTGGATATTCAGAATCATGACTGTTTTTTTA
ACATTGCTGCATATTCATTATGGAGTCACTGTGGTGAACGAACTGGCTGATCATTTCGGG
ATCCGTGTTTTCTTGATCAGAAAGCCGGAACAGAAACATGAGGATTGACAGGAGGCGTAG
AGGATGCATAGCAGTGACACCATGACCAATTAATTACCATACTACCTCAGTCATAAATAT
ATTTCGAAAGTGGCATTTCAATTTCTTCTAAAACAATATTTTCACTAAATACCTTCCCAT
TGGTTTATCACTGAGGTATCATGGTAATAAGGTAATTTGTATTCAGGATTCTTTTTCATT
ATTTATTATAAATATTTTTTCAGATTAGTTTTTTTCCCAGTACTGTATAGCAGAGGTGTG
CAACCCGCGGCCGAATTTAGGCGGCCCACGGGATGCTGCGGTTTTTGAATAGCGTACGGC
CAGGAATTCAGTGCCACTGTTTTT

InterProScan

PANTHER	CHOPT (IPR014472) - T[42-428] 1.6E-116
PIRSF	CHOPT (IPR014472) - T[47-435] 2.6E-103
Pfam	CDP-OH_P_trans (IPR000462) - T[92-176] 8.2E-15
ProSitePatterns	CDP-OH_P_trans (IPR000462) - T[154-176] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EPT1_HUMAN	47.301 %	328	1.95E-109
CHPT1_HUMAN	27.215 %	99	1.15E-22
CEPT1_HUMAN	26.753 %	113	1.64E-27