- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S84.g13805.01.t
Possible name(s)
EIF4A1; EIF4A2; EIF4A3
Gene model
Location
S84 [15,691 / 24,465]
Amino acid sequence
Length: 512
>Harore.CG.MTP2014.S84.g13805.01.p
MSPNYFKYSSASNVGETNSVQPVRPSFNMSNYERQDDYGRGQGGGQYEDRYERRNDYEYR
KDSDRGGFDNKRDNFSRPGGYGFPEQDDQRRDDGRDERPAEQQTSNGDEPRESESTYDGP
AGMDPEGLIETNWDEVIELFDDMELDEDLLRGIYAYGFEKPSAIQQRAIKPCIKGHDVIA
QAQSGTGKTATFAISILQRIDLSVKKTQALVLAPTRELAQQIMKVIMSLGDYQGVDCHAC
IGGTNMKVEMNLLSYKSPHVIVGTPGRVFDMISRQVLDTGKISMFVLDEADEMLSRGFKD
QIYNIFRRMPGNIQVVLLSATMPSDVLEVTKRFMRDPARILVKKEELTLEGIKQFYILIE
REEWKLDTLVDLYATLTITQAVIFLNTRRKVDWLTSKLRERDFTVSALHGDMEQKARELI
MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGAAIN
FVTMEDKRVLTDIEKFYHTCIEEMPMNVADLI
Nucleotide sequence
Length: 1,539
>Harore.CG.MTP2014.S84.g13805.01.t
ATGTCGCCTAATTATTTTAAGTATTCTTCCGCCAGTAACGTGGGTGAGACAAATTCAGTT
CAGCCAGTTCGGCCTTCATTCAACATGTCAAACTACGAAAGACAAGATGATTACGGAAGA
GGACAAGGAGGTGGACAATACGAAGATCGATACGAGAGACGAAACGATTACGAGTACAGA
AAAGATTCTGACAGGGGTGGATTCGACAATAAAAGAGACAACTTCTCGAGACCCGGAGGA
TACGGATTTCCCGAACAGGACGATCAGAGACGGGACGATGGAAGAGATGAAAGGCCTGCA
GAACAGCAAACCTCAAACGGTGATGAGCCTCGTGAATCGGAATCAACATACGATGGTCCA
GCGGGTATGGACCCTGAAGGACTGATTGAGACAAACTGGGATGAAGTGATTGAGTTGTTC
GATGACATGGAGCTGGATGAGGACCTTCTCCGAGGAATTTACGCTTATGGTTTTGAGAAA
CCTTCTGCGATTCAGCAACGTGCAATCAAGCCTTGCATCAAAGGGCATGATGTTATTGCC
CAGGCCCAATCTGGCACAGGCAAAACCGCCACGTTTGCCATCTCCATCCTGCAAAGGATC
GACCTCTCAGTGAAGAAAACCCAGGCTCTTGTGCTCGCTCCGACCAGAGAACTGGCACAG
CAGATTATGAAGGTGATCATGTCGCTCGGGGACTACCAGGGCGTCGACTGCCACGCTTGC
ATCGGCGGGACAAACATGAAAGTCGAAATGAATTTGTTATCTTACAAGTCACCGCATGTG
ATCGTGGGAACTCCGGGGCGCGTTTTCGACATGATTTCACGTCAAGTTCTCGACACAGGA
AAGATCAGCATGTTTGTCCTCGATGAGGCTGATGAAATGTTATCCAGAGGATTCAAGGAT
CAGATATATAACATTTTCAGACGAATGCCTGGCAATATCCAAGTCGTCTTGCTATCTGCT
ACGATGCCAAGCGACGTCCTCGAGGTGACAAAGCGTTTCATGCGTGATCCAGCCCGTATC
CTCGTTAAGAAGGAAGAACTCACCCTGGAGGGTATCAAGCAGTTCTATATCCTGATAGAG
CGTGAGGAATGGAAGCTCGACACGCTGGTTGATCTTTATGCAACTCTCACCATAACACAA
GCTGTTATTTTCCTGAATACACGAAGGAAAGTCGACTGGTTGACGTCGAAGCTTCGAGAA
AGAGATTTTACAGTCTCTGCTTTGCACGGAGACATGGAACAGAAGGCTCGGGAACTGATC
ATGCGAGAATTCCGTTCAGGTAGTTCGCGAGTCCTCATTACGACCGATCTGCTCGCTCGT
GGAATCGACGTACAGCAAGTTTCGCTCGTTATTAATTATGATTTGCCTTCCAATCGTGAA
AATTACATTCACAGAATTGGACGTGGTGGTCGTTTCGGTCGTAAAGGTGCTGCTATCAAC
TTCGTCACAATGGAAGACAAAAGAGTACTTACTGACATTGAGAAATTTTATCACACCTGC
ATCGAAGAGATGCCAATGAACGTCGCCGATTTGATTTAG
| PANTHER |
EIF4A (IPR037583) - T[118-512] 8.2E-197 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[138-166] 10.025 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[157-355] 3.2E-60 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[163-327] 4.0E-44 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[169-340] 30.453 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[206-493] 1.38E-72 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[286-294] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[351-512] 26.338 |
| CDD |
Helicase_C (IPR001650) - T[352-467] 1.1135E-33 |
| Pfam |
Helicase_C (IPR001650) - T[365-473] 6.0E-30 |
| SMART |
Helicase_C (IPR001650) - T[392-473] 1.5E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 69.577 % | 546 | 0 |
| IF4A1_HUMAN | 78.856 % | 635 | 0 |
| IF4A2_HUMAN | 79.798 % | 633 | 0 |