- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S884.g08367.01.t
Possible name(s)
IRF1; IRF2; IRF7
Gene model
Location
S884 [7,270 / 9,304]
Amino acid sequence
Length: 412
>Harore.CG.MTP2014.S884.g08367.01.p
MASQTKMKFPDWLKQKISTTDFKDLQWMDDRGKFKLPWVREGNDPHWESYYELFHAWDQR
NGGARHKNSEVKQKFRAALNKTKCIVEVKEESKKELQSGSYKVYRFLTSEEMSYALSSGY
GSPGSSSRERGEDSVSCFSTPGEDIDENYYSQQPLGIVVEETCVVAPSNEVSLIPQSDSN
PNAVISDISMPSCHSDQQRDIIQFMFSSMSIQPAMLEMCMVKISYNEGEVFCDDVRDFGN
KYRVYYRDEYELPSQNPNCIELPHRPVLNKTIFSKIIANLGEGFMIWYDREQMTYYLERL
KTCLVHIFYFDPHDPDKEAVKADKNKRIKIFSYESYCYQLNQNGFLNEFTNLPEIIIAIG
CRPTKKDYIKGIKILLKPNGALKMHQENLSHASVELSLPSTGLESAFSNMST
Nucleotide sequence
Length: 1,239
>Harore.CG.MTP2014.S884.g08367.01.t
ATGGCATCACAAACAAAAATGAAGTTTCCAGATTGGCTCAAACAGAAAATCAGTACCACT
GACTTCAAGGATTTACAATGGATGGATGACCGCGGGAAATTCAAGCTTCCGTGGGTAAGA
GAGGGTAACGACCCCCACTGGGAAAGCTACTATGAACTGTTTCATGCCTGGGACCAGAGA
AACGGCGGTGCACGTCACAAAAACTCAGAAGTTAAACAGAAATTTAGAGCTGCGTTGAAT
AAAACTAAATGTATTGTGGAAGTGAAGGAAGAATCTAAAAAGGAACTTCAATCTGGAAGC
TATAAAGTATATAGATTTCTCACCTCCGAAGAGATGTCTTATGCGCTGTCCTCTGGTTAC
GGTTCTCCTGGATCATCGTCGCGAGAAAGAGGTGAAGATTCTGTATCCTGTTTTTCAACA
CCAGGAGAAGATATTGACGAAAATTATTATAGTCAGCAACCGCTCGGAATCGTTGTCGAG
GAAACCTGTGTAGTTGCACCCAGTAACGAGGTTTCACTTATTCCACAAAGCGATTCGAAT
CCTAATGCTGTCATCAGCGATATTTCTATGCCATCGTGTCACTCTGACCAACAGCGTGAT
ATAATCCAGTTTATGTTCTCTTCTATGAGTATCCAACCAGCAATGTTAGAGATGTGCATG
GTGAAGATCTCGTATAACGAGGGAGAAGTCTTCTGCGACGATGTGAGAGACTTCGGAAAT
AAGTACAGAGTTTATTACCGTGACGAATATGAGCTGCCCTCTCAGAATCCGAATTGCATC
GAGTTGCCACACCGACCTGTTTTAAACAAGACCATATTCAGCAAGATCATTGCAAATCTT
GGCGAGGGGTTCATGATCTGGTACGATAGGGAGCAGATGACATATTACCTAGAGAGGCTT
AAGACTTGCCTGGTTCACATCTTTTATTTTGACCCTCATGACCCTGACAAAGAGGCAGTA
AAAGCTGATAAAAATAAACGGATTAAAATCTTCTCGTATGAGTCGTATTGCTATCAGTTG
AACCAAAACGGCTTTCTAAATGAGTTTACAAATCTACCCGAGATTATTATTGCTATTGGG
TGCCGCCCCACTAAAAAGGATTATATAAAAGGGATTAAGATTCTGTTGAAACCCAACGGT
GCATTGAAAATGCACCAAGAAAATTTGAGTCACGCAAGTGTTGAGCTTAGCCTCCCAAGC
ACAGGCTTGGAGAGTGCCTTTTCCAATATGTCGACATAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[2-108] 9.1E-18 |
| SMART |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[2-109] 3.7E-4 |
| PANTHER |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[4-360] 3.5E-25 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[5-108] 3.36E-14 |
| ProSiteProfiles |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[6-108] 19.617 |
| Pfam |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[8-106] 1.9E-15 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[203-386] 3.3E-11 |
| Pfam |
Interferon_reg_factor-3 (IPR019471) - T[221-343] 2.7E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|