- Transcript 'Boleac.CG.SB_v3.S98....' >
- Transcript 'Cisavi.CG.ENS81.R27....' >
- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S884.g09694.01.t
Possible name(s)
IRF2; IRF4; IRF8
Gene model
Location
S884 [9,967 / 11,686]
Amino acid sequence
Length: 410
>Harore.CG.MTP2014.S884.g09694.01.p
MASQTKMKFPDWLKEKIISSKYKDLQWMDDRGKFKLPWVREGNDPHWESYYELFHAWDQR
NGGARQKNSDVKQKFRAALNKTKCIEEVKEESEKELQFGSYKVYRFLTPVEISHAPASVY
GSPGSLSRERREDSASYFSSPGGDSEENYYSQQPLGIVGKETGVVAAYNAIPIIPQCAPN
PDAVISDISMPSCHSDDQNGMILTRFSSMGITQDMFDMCMVKISYKEGEVFCDHVRDFKM
KYRVYHRDESKLPAQNLYCIELPHQPVLNEAKFSKIIANLGDGFMIWYDKEQMTYYLERL
QTCDVHIFFFDPHEPDKEAVKADKNKPIEIFSYKSYFNQLTENDLLNEFTNIAEIIIAIG
CRPTKKDYIKGIKILLKPNGALKMRQEYSSYTSVETSITRLGDSFSKMST
Nucleotide sequence
Length: 1,233
>Harore.CG.MTP2014.S884.g09694.01.t
ATGGCATCACAAACAAAAATGAAGTTTCCAGATTGGCTCAAAGAGAAAATCATTTCCTCT
AAATACAAGGATTTACAATGGATGGATGACCGCGGGAAATTCAAGCTTCCGTGGGTAAGA
GAGGGTAACGACCCCCACTGGGAAAGCTACTATGAACTGTTTCATGCCTGGGACCAGAGA
AACGGCGGTGCACGTCAAAAAAACTCAGATGTGAAACAGAAATTTAGAGCTGCGTTGAAT
AAAACTAAATGTATTGAGGAAGTGAAAGAAGAATCTGAAAAGGAACTTCAATTTGGAAGC
TATAAAGTATATAGATTTCTCACTCCCGTAGAGATATCTCATGCGCCGGCGAGTGTTTAT
GGTTCTCCTGGATCATTGTCGAGAGAAAGAAGAGAAGATTCTGCATCCTATTTTTCATCA
CCAGGAGGAGATTCTGAAGAAAATTATTACAGTCAGCAACCGCTTGGCATTGTTGGTAAG
GAAACCGGTGTAGTTGCAGCGTACAATGCGATTCCAATCATTCCACAATGCGCTCCGAAT
CCTGATGCTGTCATCAGCGATATTTCTATGCCATCGTGCCACTCTGACGATCAGAATGGT
ATGATTCTCACTAGGTTCTCTTCTATGGGTATCACACAAGATATGTTTGATATGTGCATG
GTAAAGATCTCATATAAAGAGGGAGAAGTCTTCTGCGACCATGTGAGAGACTTCAAAATG
AAATACAGAGTTTATCACCGTGACGAGAGTAAGCTACCCGCTCAGAATCTGTATTGCATC
GAGTTGCCACACCAACCTGTTTTGAACGAGGCCAAATTCAGCAAGATCATTGCGAATCTT
GGCGATGGTTTCATGATCTGGTACGATAAGGAGCAGATGACGTATTACTTAGAGAGGCTT
CAGACCTGCGACGTTCACATCTTTTTTTTTGACCCTCATGAACCTGACAAAGAGGCAGTA
AAAGCTGATAAAAATAAACCGATCGAAATCTTTTCGTACAAGTCGTATTTTAATCAGTTG
ACCGAAAACGACTTACTGAATGAGTTTACAAATATAGCTGAGATAATAATTGCTATAGGG
TGCCGCCCCACTAAAAAGGATTATATAAAAGGGATCAAGATTTTGTTGAAACCCAATGGT
GCGTTAAAAATGCGTCAAGAATATTCCAGTTACACAAGTGTTGAAACAAGCATCACAAGA
CTAGGAGACAGCTTTTCCAAAATGTCGACATAA
| SMART |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[2-109] 7.9E-5 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[2-108] 5.8E-18 |
| PANTHER |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[4-341] 3.2E-24 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[5-108] 3.45E-14 |
| ProSiteProfiles |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[6-108] 21.113 |
| Pfam |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[8-106] 1.3E-15 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[211-377] 1.7E-10 |
| Pfam |
Interferon_reg_factor-3 (IPR019471) - T[220-357] 2.0E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|