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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L112.2.v4....'
  2. Transcript 'KH2012:KH.C5.286.v1....'
  3. Transcript 'KH2012:KH.C5.286.v1....'
  4. Transcript 'Haaura.CG.MTP2014.S1...'
  5. Transcript 'Harore.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S89.g08736.01.t

Possible name(s)

NOP2; NSUN2; NSUN6

Location

S89 [48,171 / 50,692]

Sequences

Amino acid sequence

Length: 747

>Harore.CG.MTP2014.S89.g08736.01.p
MSDVTLTFYLRLFMCRIAKIQSLITKHHCLTCLIDKDTVMGKRGKKKQKGGARPIRCDYK
DIIKENKRFEEYYKGQQCIPSEEFDSFMEAMRKPLPVVYRLTGYKSHAKQLLKQMKKNHF
QNLDSIDLAGDEMELPHSLPWYPDELAWQTNLTRTQIRKIPQLESFHNFLITETESGHVT
RQEAVSMIPPLLLDIQPHHKVLDLCAAPGSKTAQLIERLHSGAENSTEGLCIANDKDNKR
CYMLVHQTSRLNSPISMIVNHDAARFPDLVVKDDEGKKSFLKFDRVLADVPCSGDGTMRK
NTDVWKKWNVANGVYLHRLQSHILRRGLELLKPGGKIVYSTCSLNPIENEAVVASMLEKC
EGALELIDVSTELKGLKRCAGISSWRVLARNMVWLERFSDVPDDDHQIKYSMFPSENPEK
VKNMHLERCLRLLPHHQNTGGFFVAVMKKVSVLPWEEARNEKLVEACSHDSAAPPTKKKR
WFPGFREDPFVFLDQSDSDISNQIKSFYALKEEFPVENLLTRTEQAKKKHVYLVSPLVRN
VIVNNRDSLKVVNSGVRVFTRCDNNQPNLECAFRIVQDGNECILPFMQQRIVNIGIQDSI
VMLCEEQPLFSVLSDDVRKQLGDLKPGCLLFKYVYDHTRDGESNVNCDLLMSGWRGNKSA
RLYMSKFERAHFLNLIGHDVPEIYLPNTNTRRKRADGTDNTENSEVSDVKSESDVVAVES
EDITEVKSGCDVVKDEEETNLQNPTIE

Nucleotide sequence

Length: 2,244

>Harore.CG.MTP2014.S89.g08736.01.t
ATGTCAGATGTTACATTAACTTTTTATTTGCGACTTTTTATGTGCCGTATAGCTAAAATA
CAGTCACTCATTACAAAGCATCACTGTCTTACTTGCTTGATCGATAAGGATACGGTAATG
GGGAAAAGAGGAAAAAAAAAACAAAAGGGTGGTGCGCGGCCAATTAGATGCGATTATAAA
GACATCATAAAGGAGAACAAGCGATTCGAAGAGTATTATAAGGGACAGCAATGTATTCCA
TCTGAAGAATTTGATAGCTTCATGGAGGCGATGAGAAAGCCACTTCCTGTAGTCTATCGA
TTAACAGGATACAAAAGTCATGCCAAGCAACTTTTGAAGCAAATGAAAAAAAATCATTTC
CAGAACTTGGACAGCATTGATCTAGCTGGTGACGAAATGGAACTGCCACATAGTCTGCCA
TGGTATCCAGATGAATTGGCATGGCAAACGAACCTTACCCGTACTCAGATACGTAAAATA
CCGCAATTGGAAAGTTTCCATAACTTCTTGATCACTGAGACGGAAAGCGGACACGTAACT
CGACAAGAGGCTGTCAGCATGATTCCACCATTGCTCTTAGATATCCAGCCTCATCATAAG
GTTTTGGATCTTTGTGCAGCACCCGGATCAAAAACTGCTCAGCTTATAGAGAGACTCCAT
AGCGGAGCTGAGAACTCGACCGAAGGTCTTTGCATAGCTAATGATAAAGATAATAAGCGT
TGTTACATGCTGGTACATCAAACCAGCAGATTAAACAGCCCTATTTCAATGATCGTTAAT
CATGATGCTGCAAGGTTTCCCGATCTAGTGGTAAAAGACGACGAAGGAAAGAAATCTTTT
CTCAAATTTGACCGGGTTCTAGCGGATGTACCATGCTCTGGAGATGGAACAATGAGAAAA
AATACTGATGTGTGGAAGAAGTGGAATGTTGCGAATGGTGTGTATTTACATAGACTACAG
TCGCATATATTACGACGTGGACTCGAGCTTCTCAAGCCTGGTGGAAAAATTGTTTATTCT
ACTTGCTCTCTAAATCCAATAGAAAATGAAGCCGTTGTTGCAAGTATGTTAGAAAAATGT
GAAGGTGCTCTTGAGCTGATTGATGTTAGTACCGAGTTGAAAGGTCTCAAAAGATGTGCT
GGTATATCCAGTTGGCGCGTTTTAGCGAGAAACATGGTTTGGCTTGAAAGGTTTTCCGAT
GTCCCTGATGATGATCATCAAATTAAATACAGTATGTTCCCATCTGAAAATCCTGAAAAG
GTAAAAAACATGCATCTAGAGCGATGTCTCCGACTACTGCCCCATCACCAAAACACTGGA
GGCTTTTTTGTGGCCGTTATGAAAAAAGTTTCCGTATTACCGTGGGAGGAAGCAAGGAAT
GAAAAGTTGGTTGAAGCTTGCTCACATGATTCAGCTGCACCACCCACCAAAAAAAAACGC
TGGTTTCCAGGATTTCGAGAGGATCCTTTCGTGTTTCTTGATCAAAGTGACTCCGACATC
AGCAATCAGATTAAATCTTTTTACGCATTGAAAGAGGAATTTCCTGTAGAAAACCTATTG
ACCAGAACTGAGCAAGCAAAGAAAAAGCATGTGTATTTGGTTTCACCTCTTGTGCGGAAT
GTGATTGTTAATAACAGAGATAGTCTGAAGGTTGTCAATTCAGGTGTCAGGGTATTCACC
AGATGTGACAATAATCAGCCCAATTTGGAATGTGCTTTCAGAATCGTACAGGATGGAAAT
GAGTGCATCTTACCATTCATGCAACAAAGGATTGTTAACATAGGGATACAGGATTCTATT
GTAATGCTTTGCGAAGAACAACCTCTCTTTTCTGTTTTATCGGATGATGTCAGAAAGCAA
CTTGGTGATTTGAAACCGGGATGCTTGCTATTCAAATATGTGTACGATCACACAAGAGAT
GGAGAGAGTAATGTGAACTGTGATCTGCTTATGAGTGGATGGAGAGGGAATAAATCGGCA
CGCCTCTACATGAGTAAATTTGAGAGAGCCCATTTTTTAAACTTGATTGGCCACGATGTG
CCTGAAATTTACCTGCCTAATACCAACACTCGTAGAAAGCGGGCTGATGGAACAGATAAC
ACAGAGAATAGCGAAGTTTCTGATGTCAAAAGTGAAAGCGATGTAGTAGCAGTAGAAAGC
GAAGATATAACCGAAGTCAAAAGTGGATGTGATGTTGTGAAAGATGAAGAAGAAACAAAC
CTTCAGAACCCAACAATTGAATAG

InterProScan

SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[72-383] 1.63E-60 - T[422-450] 1.63E-60
ProSiteProfiles
MeTrfase_RsmB/NOP2 (IPR001678) - T[87-450] 62.412
PRINTS
RCMT_NCL1 (IPR023270) - T[148-169] 2.9E-14 - T[368-387] 2.9E-14 - T[549-561] 2.9E-14
PRINTS
RCMT (IPR023267) - T[173-187] 2.6E-24 - T[202-212] 2.6E-24 - T[284-296] 2.6E-24 - T[334-350] 2.6E-24 - T[432-449] 2.6E-24
Pfam
MeTrfase_RsmB/NOP2 (IPR001678) - T[191-447] 2.8E-39
ProSitePatterns
Fmu/NOL1/Nop2p_CS (IPR018314) - T[283-294] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOP2_HUMAN 25.693 % 99 2.63E-21
NSUN2_HUMAN 45.394 % 653 0
NSUN6_HUMAN 32.184 % 91.7 2.05E-19