- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S89.g08736.01.t
Possible name(s)
NOP2; NSUN2; NSUN6
Gene model
Location
S89 [48,171 / 50,692]
Amino acid sequence
Length: 747
>Harore.CG.MTP2014.S89.g08736.01.p
MSDVTLTFYLRLFMCRIAKIQSLITKHHCLTCLIDKDTVMGKRGKKKQKGGARPIRCDYK
DIIKENKRFEEYYKGQQCIPSEEFDSFMEAMRKPLPVVYRLTGYKSHAKQLLKQMKKNHF
QNLDSIDLAGDEMELPHSLPWYPDELAWQTNLTRTQIRKIPQLESFHNFLITETESGHVT
RQEAVSMIPPLLLDIQPHHKVLDLCAAPGSKTAQLIERLHSGAENSTEGLCIANDKDNKR
CYMLVHQTSRLNSPISMIVNHDAARFPDLVVKDDEGKKSFLKFDRVLADVPCSGDGTMRK
NTDVWKKWNVANGVYLHRLQSHILRRGLELLKPGGKIVYSTCSLNPIENEAVVASMLEKC
EGALELIDVSTELKGLKRCAGISSWRVLARNMVWLERFSDVPDDDHQIKYSMFPSENPEK
VKNMHLERCLRLLPHHQNTGGFFVAVMKKVSVLPWEEARNEKLVEACSHDSAAPPTKKKR
WFPGFREDPFVFLDQSDSDISNQIKSFYALKEEFPVENLLTRTEQAKKKHVYLVSPLVRN
VIVNNRDSLKVVNSGVRVFTRCDNNQPNLECAFRIVQDGNECILPFMQQRIVNIGIQDSI
VMLCEEQPLFSVLSDDVRKQLGDLKPGCLLFKYVYDHTRDGESNVNCDLLMSGWRGNKSA
RLYMSKFERAHFLNLIGHDVPEIYLPNTNTRRKRADGTDNTENSEVSDVKSESDVVAVES
EDITEVKSGCDVVKDEEETNLQNPTIE
Nucleotide sequence
Length: 2,244
>Harore.CG.MTP2014.S89.g08736.01.t
ATGTCAGATGTTACATTAACTTTTTATTTGCGACTTTTTATGTGCCGTATAGCTAAAATA
CAGTCACTCATTACAAAGCATCACTGTCTTACTTGCTTGATCGATAAGGATACGGTAATG
GGGAAAAGAGGAAAAAAAAAACAAAAGGGTGGTGCGCGGCCAATTAGATGCGATTATAAA
GACATCATAAAGGAGAACAAGCGATTCGAAGAGTATTATAAGGGACAGCAATGTATTCCA
TCTGAAGAATTTGATAGCTTCATGGAGGCGATGAGAAAGCCACTTCCTGTAGTCTATCGA
TTAACAGGATACAAAAGTCATGCCAAGCAACTTTTGAAGCAAATGAAAAAAAATCATTTC
CAGAACTTGGACAGCATTGATCTAGCTGGTGACGAAATGGAACTGCCACATAGTCTGCCA
TGGTATCCAGATGAATTGGCATGGCAAACGAACCTTACCCGTACTCAGATACGTAAAATA
CCGCAATTGGAAAGTTTCCATAACTTCTTGATCACTGAGACGGAAAGCGGACACGTAACT
CGACAAGAGGCTGTCAGCATGATTCCACCATTGCTCTTAGATATCCAGCCTCATCATAAG
GTTTTGGATCTTTGTGCAGCACCCGGATCAAAAACTGCTCAGCTTATAGAGAGACTCCAT
AGCGGAGCTGAGAACTCGACCGAAGGTCTTTGCATAGCTAATGATAAAGATAATAAGCGT
TGTTACATGCTGGTACATCAAACCAGCAGATTAAACAGCCCTATTTCAATGATCGTTAAT
CATGATGCTGCAAGGTTTCCCGATCTAGTGGTAAAAGACGACGAAGGAAAGAAATCTTTT
CTCAAATTTGACCGGGTTCTAGCGGATGTACCATGCTCTGGAGATGGAACAATGAGAAAA
AATACTGATGTGTGGAAGAAGTGGAATGTTGCGAATGGTGTGTATTTACATAGACTACAG
TCGCATATATTACGACGTGGACTCGAGCTTCTCAAGCCTGGTGGAAAAATTGTTTATTCT
ACTTGCTCTCTAAATCCAATAGAAAATGAAGCCGTTGTTGCAAGTATGTTAGAAAAATGT
GAAGGTGCTCTTGAGCTGATTGATGTTAGTACCGAGTTGAAAGGTCTCAAAAGATGTGCT
GGTATATCCAGTTGGCGCGTTTTAGCGAGAAACATGGTTTGGCTTGAAAGGTTTTCCGAT
GTCCCTGATGATGATCATCAAATTAAATACAGTATGTTCCCATCTGAAAATCCTGAAAAG
GTAAAAAACATGCATCTAGAGCGATGTCTCCGACTACTGCCCCATCACCAAAACACTGGA
GGCTTTTTTGTGGCCGTTATGAAAAAAGTTTCCGTATTACCGTGGGAGGAAGCAAGGAAT
GAAAAGTTGGTTGAAGCTTGCTCACATGATTCAGCTGCACCACCCACCAAAAAAAAACGC
TGGTTTCCAGGATTTCGAGAGGATCCTTTCGTGTTTCTTGATCAAAGTGACTCCGACATC
AGCAATCAGATTAAATCTTTTTACGCATTGAAAGAGGAATTTCCTGTAGAAAACCTATTG
ACCAGAACTGAGCAAGCAAAGAAAAAGCATGTGTATTTGGTTTCACCTCTTGTGCGGAAT
GTGATTGTTAATAACAGAGATAGTCTGAAGGTTGTCAATTCAGGTGTCAGGGTATTCACC
AGATGTGACAATAATCAGCCCAATTTGGAATGTGCTTTCAGAATCGTACAGGATGGAAAT
GAGTGCATCTTACCATTCATGCAACAAAGGATTGTTAACATAGGGATACAGGATTCTATT
GTAATGCTTTGCGAAGAACAACCTCTCTTTTCTGTTTTATCGGATGATGTCAGAAAGCAA
CTTGGTGATTTGAAACCGGGATGCTTGCTATTCAAATATGTGTACGATCACACAAGAGAT
GGAGAGAGTAATGTGAACTGTGATCTGCTTATGAGTGGATGGAGAGGGAATAAATCGGCA
CGCCTCTACATGAGTAAATTTGAGAGAGCCCATTTTTTAAACTTGATTGGCCACGATGTG
CCTGAAATTTACCTGCCTAATACCAACACTCGTAGAAAGCGGGCTGATGGAACAGATAAC
ACAGAGAATAGCGAAGTTTCTGATGTCAAAAGTGAAAGCGATGTAGTAGCAGTAGAAAGC
GAAGATATAACCGAAGTCAAAAGTGGATGTGATGTTGTGAAAGATGAAGAAGAAACAAAC
CTTCAGAACCCAACAATTGAATAG
| SUPERFAMILY |
SAM-dependent_MTases (IPR029063) - T[72-383] 1.63E-60 - T[422-450] 1.63E-60 |
| ProSiteProfiles |
MeTrfase_RsmB/NOP2 (IPR001678) - T[87-450] 62.412 |
| PRINTS |
RCMT_NCL1 (IPR023270) - T[148-169] 2.9E-14 - T[368-387] 2.9E-14 - T[549-561] 2.9E-14 |
| PRINTS |
RCMT (IPR023267) - T[173-187] 2.6E-24 - T[202-212] 2.6E-24 - T[284-296] 2.6E-24 - T[334-350] 2.6E-24 - T[432-449] 2.6E-24 |
| Pfam |
MeTrfase_RsmB/NOP2 (IPR001678) - T[191-447] 2.8E-39 |
| ProSitePatterns |
Fmu/NOL1/Nop2p_CS (IPR018314) - T[283-294] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOP2_HUMAN | 25.693 % | 99 | 2.63E-21 |
| NSUN2_HUMAN | 45.394 % | 653 | 0 |
| NSUN6_HUMAN | 32.184 % | 91.7 | 2.05E-19 |