- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S8.g10631.01.t
Possible name(s)
AC012314.17; RPS9
Gene model
Location
S8 [391,440 / 392,016]
Amino acid sequence
Length: 191
>Harore.CG.MTP2014.S8.g10631.01.p
MPHARSLVRSKTYVTPRRPFEKTRLDQELKLIGEYGLKNKREVWRVKLTLAKIRKAAREL
LTLDEKNPKRLFEGNALLRRLVRIGVLDETKMKLDYVLGLKIEDFLERRLQTQVFKLGLA
KSIHHARVLILQRHIRVRKQVVNIPSFLVRLDSQKHIDFSLRSPYGGGRPGRVKRKNMKK
GTGEADEEDED
Nucleotide sequence
Length: 576
>Harore.CG.MTP2014.S8.g10631.01.t
ATGCCGCATGCTAGGAGTTTAGTTCGTAGTAAAACTTACGTGACACCTCGACGTCCGTTC
GAAAAAACCCGTCTCGATCAAGAATTGAAACTCATAGGTGAATACGGTCTTAAAAATAAG
CGAGAAGTATGGCGGGTAAAGCTGACGCTAGCCAAAATTCGTAAGGCAGCTCGTGAGCTG
TTGACCCTCGACGAAAAAAATCCAAAACGATTGTTCGAAGGTAACGCCTTGCTGAGAAGA
CTGGTACGTATCGGAGTCTTGGACGAGACGAAAATGAAACTCGATTATGTCCTGGGTCTT
AAGATCGAAGATTTCTTGGAAAGACGACTACAAACCCAAGTTTTCAAACTGGGATTGGCG
AAGTCGATTCACCACGCTCGTGTTTTGATTCTCCAGCGGCATATCCGAGTCAGAAAGCAA
GTTGTTAACATCCCTTCATTTCTTGTGCGACTTGATTCACAAAAACACATTGATTTCTCA
TTGAGATCTCCATATGGAGGCGGGAGACCTGGGCGCGTCAAGAGGAAAAATATGAAGAAG
GGAACTGGAGAGGCTGATGAAGAGGATGAGGATTAA
| TIGRFAM |
Ribosomal_S4/S9_euk/arc (IPR005710) - T[1-165] 3.4E-71 |
| SMART |
Ribosomal_S4/S9_N (IPR001912) - T[5-107] 2.4E-19 |
| PANTHER |
Ribosomal_S4/S9 (IPR022801) - T[8-188] 1.2E-92 |
| Pfam |
Ribosomal_S4/S9_N (IPR001912) - T[19-63] 6.8E-6 |
| ProSitePatterns |
Ribosomal_S4_CS (IPR018079) - T[106-130] . |
| SMART |
S4_RNA-bd (IPR002942) - T[108-172] 0.0024 |
| Pfam |
S4_RNA-bd (IPR002942) - T[108-151] 2.9E-10 |
| CDD |
S4_RNA-bd (IPR002942) - T[108-150] 9.65877E-7 |
| ProSiteProfiles |
S4_RNA-bd (IPR002942) - T[108-179] 9.708 |
| Gene3D |
S4_RNA-bd_sf (IPR036986) - T[109-180] 1.4E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS9_HUMAN | 87.629 % | 328 | 1.57E-116 |