- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.L128.12.v1...' >
- Transcript 'KH2012:KH.C9.235.v4....' >
- Transcript 'Harore.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S90.g05793.01.t
Possible name(s)
H1F0; HIST1H1C; HIST1H1D
Gene model
Location
S90 [133,736 / 134,255]
Amino acid sequence
Length: 172
>Harore.CG.MTP2014.S90.g05793.01.p
MTDKQAKKKAVAKPASHPKYSVMITAAVGASKSRTGSSRQAISKYIKGEYTVGDNFDTQV
KLALKRMVIAKELIQVKGAGASGSFKLPAKGKPAEKKETKTPTKKAVAKPKKTTKVVAKK
ATPKKKAAAKKTTTAKRRPPVMKKVAATHTPSKSKAKPKTKKTAAKKAKGKK
Nucleotide sequence
Length: 519
>Harore.CG.MTP2014.S90.g05793.01.t
ATGACTGACAAACAAGCAAAAAAGAAGGCTGTAGCGAAACCTGCAAGTCACCCGAAGTAT
TCTGTAATGATTACTGCTGCGGTGGGAGCCAGCAAGAGCCGGACCGGCTCGTCCAGGCAA
GCCATCTCGAAGTATATTAAAGGTGAATACACGGTTGGTGACAACTTCGACACCCAGGTG
AAGCTCGCACTTAAACGAATGGTGATAGCCAAAGAACTGATCCAAGTTAAGGGTGCTGGG
GCATCGGGTTCTTTCAAACTTCCCGCTAAAGGAAAACCGGCGGAAAAGAAAGAAACTAAA
ACGCCAACAAAGAAGGCTGTTGCAAAGCCGAAAAAGACAACCAAGGTTGTAGCAAAGAAG
GCTACACCAAAAAAGAAAGCCGCGGCCAAGAAAACGACAACTGCCAAAAGACGACCCCCC
GTAATGAAGAAGGTAGCGGCTACACACACGCCAAGCAAAAGCAAAGCCAAGCCGAAAACA
AAGAAGACTGCGGCGAAGAAAGCAAAGGGCAAGAAATGA
| PRINTS |
Histone_H5 (IPR005819) - T[3-24] 6.3E-33 - T[30-47] 6.3E-33 - T[50-68] 6.3E-33 - T[71-95] 6.3E-33 - T[105-119] 6.3E-33 - T[156-172] 6.3E-33 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[11-101] 2.3E-31 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[13-100] 1.36E-22 |
| SMART |
Histone_H1/H5_H15 (IPR005818) - T[14-79] 5.9E-25 |
| ProSiteProfiles |
Histone_H1/H5_H15 (IPR005818) - T[16-89] 31.203 |
| Pfam |
Histone_H1/H5_H15 (IPR005818) - T[17-87] 3.8E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| H10_HUMAN | 56.471 % | 99.4 | 1.41E-26 |