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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.166.v2....'
  2. Transcript 'Boleac.CG.SB_v3.S124...'
  3. Transcript 'Harore.CG.MTP2014.S1...'
  4. Transcript 'Moocci.CG.ELv1_2.S54...'
  5. Transcript 'Harore.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S929.g04941.01.t

Possible name(s)

CALM1; CALM3; CETN1

Location

S929 [9,317 / 12,556]

Sequences

Amino acid sequence

Length: 514

>Harore.CG.MTP2014.S929.g04941.01.p
MEQLSEKDNSVEGQDKEVAESNPDDLASEDAKGISPESNKKSKPHKKSSLPLSTKKIQVG
KLPTRSTVGAPRHRSTFGSTDWSVLNESQLISFRKLFSKFDQSESGGISADELYGAMQTL
MPDEKISFEVAKKVHREFDIKCTGEIEFDEFLFAVTHPKNYLKLIQDDDSKQLTKEIKLW
ERFQNHRQSKTSVTKKDSNGDYRDRNIFFTMLKTATKKDSMSEIRHFYVNRIKKLNDHVI
HDWSAGQRCIGLSDQDILRRYDHIIKELKNKKSPFAKEKLYQASPYAKPLYWGIAELKLA
DAKKKDLKCNKSGRSVKQDGKHRQCSKSASGLRKPPLASTDEAIEHHRSSIDELEFKTEK
VSPGEISRKPDGEKRSDKDGVKINAIRAFYSQPTGMMSKAHTKKAGAAKKSPRSAPPRRP
KISEFVSTPKVVPLPVYPIRDIPQSFDYDNVVGIRKRVDHMSPMLRSIFKKSYLAYSGEY
EPFVVSPWIPFPVPSSWIPYPPLGQSCEPKSTWS

Nucleotide sequence

Length: 1,545

>Harore.CG.MTP2014.S929.g04941.01.t
ATGGAACAACTATCGGAAAAAGATAATTCAGTCGAAGGCCAAGATAAGGAAGTTGCGGAA
TCAAATCCTGACGATCTTGCGAGTGAAGACGCCAAAGGCATTTCTCCTGAATCAAATAAA
AAATCAAAGCCTCACAAAAAGAGTTCTTTGCCTCTGTCAACGAAGAAAATACAAGTAGGA
AAACTGCCGACACGATCGACTGTGGGTGCACCGAGACATCGCTCAACGTTTGGCTCTACA
GACTGGTCTGTCCTCAACGAGTCACAATTAATTTCATTTCGCAAGCTTTTCTCCAAATTC
GATCAAAGTGAAAGCGGAGGAATAAGTGCAGATGAACTCTATGGTGCCATGCAGACTCTG
ATGCCGGATGAAAAGATTTCCTTTGAAGTGGCTAAAAAGGTTCACAGAGAGTTCGACATC
AAATGTACAGGAGAAATCGAATTTGACGAGTTTTTATTCGCAGTAACCCATCCAAAAAAT
TATTTAAAGCTAATACAAGATGATGACAGTAAACAGCTTACAAAAGAGATAAAACTCTGG
GAAAGATTCCAAAATCATCGACAATCGAAGACCTCTGTAACAAAAAAGGACTCAAATGGC
GATTATCGCGACAGAAATATATTTTTCACGATGCTCAAAACTGCTACAAAGAAGGATTCA
ATGAGTGAAATTCGGCATTTTTACGTCAACAGAATAAAGAAATTGAATGATCATGTGATA
CATGATTGGTCTGCTGGACAAAGATGCATCGGCCTTTCGGATCAAGATATCCTGCGGAGA
TACGATCACATTATCAAAGAGCTGAAAAATAAAAAATCTCCGTTTGCGAAAGAGAAACTT
TATCAGGCATCGCCTTATGCGAAGCCTTTGTACTGGGGAATTGCTGAATTGAAGCTCGCA
GATGCCAAGAAAAAGGATCTGAAATGCAACAAATCTGGTCGTTCAGTAAAGCAAGACGGA
AAACATCGACAATGTTCCAAGTCTGCCTCGGGATTAAGAAAGCCACCCCTGGCAAGCACA
GACGAGGCGATAGAACATCATCGAAGTTCTATCGATGAATTAGAATTCAAGACAGAAAAA
GTCTCTCCTGGTGAAATCTCTCGTAAGCCTGATGGCGAAAAACGATCTGACAAAGATGGC
GTGAAAATAAACGCTATTCGAGCTTTTTACAGTCAACCAACAGGAATGATGTCAAAAGCT
CACACGAAAAAGGCGGGAGCGGCCAAAAAAAGCCCCCGGAGTGCCCCTCCACGTCGTCCT
AAAATATCTGAATTCGTTTCCACCCCAAAAGTTGTCCCGCTTCCTGTCTATCCGATTCGA
GATATTCCGCAATCATTTGATTATGATAATGTGGTCGGAATTCGTAAGCGAGTTGACCAC
ATGAGTCCAATGCTGCGCAGTATTTTCAAGAAATCCTACTTGGCCTATTCCGGCGAATAC
GAGCCTTTTGTAGTATCTCCTTGGATTCCATTCCCAGTACCTTCATCTTGGATCCCTTAC
CCGCCGCTCGGTCAAAGCTGCGAGCCAAAGTCGACCTGGTCATGA

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[84-160] 3.77E-13
ProSiteProfiles
EF_hand_dom (IPR002048) - T[88-123] 10.692 - T[126-161] 8.404
CDD
EF_hand_dom (IPR002048) - T[93-156] 5.3212E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value