- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Moocul.CG.ELv1_2.S69...' >
- Transcript 'Harore.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S934.g07860.01.t
Possible name(s)
PTPRA; PTPRC; PTPRE
Gene model
Location
S934 [2,860 / 8,039]
Amino acid sequence
Length: 728
>Harore.CG.MTP2014.S934.g07860.01.p
MDRDLEIQTYYIDLLAVFIPGQDWLFKLLRLDKIPKIELELDSETTLRFIIPSLNEERGL
VRCIFVIVGKYQDMENNQTISINLFKTLSTSPREYLALAINYTGSQLSRTLGDNTTSSCT
LYNQQQNPEVIQAINHPLKFNETYRVYYITAVETNQGIKFSKSQAQTETTRQPPPPTTSV
TSTSNDEGTPLSRFENNYKNLLANNSKGFQNLFEGIATEIGTKELPHIDHTLPENKSKNR
YKNIYPFDHSRVVLEQKEGSNGYMNAAYIDGNSIPYKYIATQGPKKNTVNDFWRMIWEKN
VNFIVMLTKCIEKKKEKSFKYWPVAGTKVTFGDVTVFTREDAEYGGYWRRVIIITHSDTG
IGLPREIIQFHMVKWPDHGVPVSTSNMLRLYNHVIHETQASTTTYDNVGPLLVHCSAGVG
RTGTFIALDILSEQMTKSDQVNVRGCVLNMRMSRTEMIQTLDQFIFLHKLILEINLLPQC
EMTPEDFPNKLDDTERLQEEFNSIDRVPPVKISSKIAFENRKKNRDQNCVPYDKNRVFIQ
LLGDESKVLYINASYIQNYMNGFGIIAAQEPLDGDEEYFWRMVWDNDVRVVVRMSGKGFR
GSCNFGQINGSGEVLSANDAFVERKVRITHNGSRNSYEAYELEFKLWNDVNDIPSPASLL
ELVTKMTSLAHTQEHVLISCDNGCGRTGVLCAIYLLLERLKTENRIDVFRTVKDLRDARP
NMVNSLVS
Nucleotide sequence
Length: 2,187
>Harore.CG.MTP2014.S934.g07860.01.t
ATGGATAGAGATTTAGAGATACAGACATATTATATTGATTTACTTGCGGTTTTCATACCT
GGGCAAGACTGGCTATTCAAGCTATTAAGGCTTGATAAAATTCCAAAAATTGAATTGGAA
CTTGATTCGGAAACCACGCTAAGATTTATAATTCCTTCACTGAATGAAGAAAGAGGCTTA
GTTCGTTGCATTTTCGTTATTGTGGGAAAATATCAAGACATGGAAAATAACCAAACGATT
TCGATTAATTTATTCAAGACGTTATCGACATCACCACGAGAATATTTGGCACTTGCAATC
AATTATACCGGTTCTCAATTATCGAGGACATTGGGAGACAATACAACATCTTCCTGTACT
CTGTATAATCAGCAACAAAATCCTGAAGTTATTCAAGCAATCAACCATCCTTTGAAGTTC
AATGAAACATACAGAGTCTACTACATAACTGCTGTTGAAACAAACCAAGGAATAAAATTC
TCCAAAAGTCAGGCTCAAACAGAAACTACAAGGCAACCACCACCACCTACAACATCAGTG
ACTTCAACATCCAATGACGAAGGAACCCCCCTTTCTAGATTTGAAAACAATTACAAGAAT
TTATTGGCGAATAATTCGAAAGGTTTTCAAAATCTTTTTGAGGGAATAGCAACAGAAATA
GGTACTAAGGAACTTCCTCATATAGATCACACTTTGCCGGAAAATAAATCGAAAAATAGA
TACAAGAATATCTATCCTTTCGATCACTCCAGAGTGGTTTTGGAACAAAAGGAAGGAAGC
AATGGTTATATGAATGCTGCATATATAGATGGGAATTCCATCCCATACAAATACATTGCG
ACTCAGGGACCGAAGAAGAATACAGTGAATGATTTCTGGAGAATGATTTGGGAGAAAAAT
GTCAATTTTATTGTGATGCTGACAAAATGTATCGAGAAGAAAAAGGAAAAGAGTTTCAAG
TATTGGCCTGTTGCTGGAACTAAAGTTACGTTTGGTGACGTCACTGTATTTACACGAGAA
GATGCTGAATATGGAGGATACTGGAGAAGAGTGATTATAATAACACACAGCGATACTGGG
ATTGGATTACCACGAGAAATAATTCAATTTCACATGGTTAAATGGCCTGATCATGGAGTT
CCTGTATCAACATCAAATATGCTTCGTTTGTACAATCACGTCATTCATGAAACACAGGCA
TCAACAACGACATACGACAATGTTGGACCACTCTTAGTACATTGCAGTGCTGGAGTTGGA
CGTACTGGAACTTTCATTGCATTGGACATACTGAGCGAACAAATGACAAAAAGTGATCAA
GTCAATGTTCGAGGTTGTGTTTTGAATATGAGAATGAGTAGGACAGAGATGATTCAAACG
CTTGATCAATTTATTTTTCTTCACAAGTTAATCTTGGAGATTAATCTTTTACCTCAATGT
GAAATGACACCTGAAGATTTTCCAAACAAACTGGATGACACTGAAAGACTACAAGAGGAA
TTCAATTCAATTGATCGTGTACCACCAGTAAAGATTTCAAGTAAGATTGCATTTGAGAAT
CGAAAGAAAAATCGAGATCAGAATTGCGTACCATACGACAAGAACAGAGTTTTTATACAA
CTGCTGGGTGATGAAAGCAAAGTTCTTTATATTAATGCTTCATATATACAGAACTATATG
AACGGATTTGGAATAATCGCTGCACAAGAACCGTTAGATGGTGATGAAGAGTATTTCTGG
AGAATGGTTTGGGACAATGATGTACGAGTTGTGGTTAGAATGAGCGGGAAGGGATTTAGA
GGATCTTGCAATTTCGGACAAATCAATGGTAGCGGAGAAGTTTTATCAGCGAATGATGCT
TTCGTGGAAAGGAAGGTTCGCATAACTCATAATGGATCCAGGAATTCGTATGAAGCTTAT
GAACTTGAATTCAAACTATGGAATGACGTCAATGACATTCCGTCACCAGCAAGCTTGCTT
GAACTAGTTACGAAAATGACGTCATTGGCACATACCCAAGAACACGTGTTGATTAGTTGC
GATAACGGTTGCGGACGCACGGGGGTGCTGTGTGCTATTTATCTTTTACTTGAACGACTC
AAAACAGAGAACAGAATCGATGTATTCAGAACTGTGAAAGATTTGAGAGATGCAAGACCT
AATATGGTCAATTCACTTGTAAGTTAA
| Gene3D |
Prot-tyrosine_phosphatase-like (IPR029021) - T[185-477] 2.6E-95 - T[481-727] 1.5E-51 |
| SUPERFAMILY |
Prot-tyrosine_phosphatase-like (IPR029021) - T[188-473] 1.05E-88 - T[487-726] 2.75E-51 |
| SMART |
PTPase_domain (IPR000242) - T[208-476] 4.0E-99 - T[496-728] 5.6E-33 |
| ProSiteProfiles |
PTPase_domain (IPR000242) - T[209-474] 49.583 - T[497-728] 28.537 |
| Pfam |
PTPase_domain (IPR000242) - T[235-473] 1.0E-73 - T[520-726] 6.2E-41 |
| PRINTS |
PTPase_domain (IPR000242) - T[262-269] 1.6E-33 - T[278-298] 1.6E-33 - T[365-382] 1.6E-33 - T[410-428] 1.6E-33 - T[441-456] 1.6E-33 - T[457-467] 1.6E-33 |
| SMART |
Tyr_Pase_cat (IPR003595) - T[366-473] 6.5E-35 - T[638-728] 2.0E-8 |
| ProSiteProfiles |
TYR_PHOSPHATASE_dom (IPR000387) - T[385-465] 18.51 - T[657-728] 14.931 |
| ProSitePatterns |
Tyr_Pase_AS (IPR016130) - T[413-423] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRA_HUMAN | 33.717 % | 294 | 2.44E-88 |
| PTPRE_HUMAN | 33.741 % | 287 | 9.88E-87 |
| PTPRC_HUMAN | 31.81 % | 283 | 1.08E-81 |