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TRANSCRIPT CARD

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  1. Transcript 'Mooccu.CG.ELv1_2.S49...' > 
  2. Transcript 'KH2012:KH.S852.1.v1....' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S8...' > 
  5. Transcript 'Harore.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S95.g13553.01.t

Possible name(s)

AC113404.3; RAP1A; RAP1B

Gene model

Harore.CG.MTP2014.S95.g13553

Location

S95 [26,521 / 35,695]

Sequences

Amino acid sequence

Length: 234

>Harore.CG.MTP2014.S95.g13553.01.p
MIDYTKVIASMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVETDNQQ
CMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITSQSSFNDLQDLREQILRVKDTDDVP
MVLVGNKCDLEGERTVGKDTGSQLARQWNNCCFLETSARQKINVNEIFFDIVRQINRKTP
EPRKKKKKSKGCILFFNPSPLLPPLMYFHGNINFLYFTIFLTSLGFFLLISPIT

Nucleotide sequence

Length: 2,404

>Harore.CG.MTP2014.S95.g13553.01.t
AGTGCTATTGTATTGTATCTGTAAACTATATGTCAATATATATATATTTATCTACAAAGA
CCTGAATCACTAACCTTACTACTGTCCAGATCAACCTCTGCTGTCACTTATTTGCAGTGC
TGTTAAGATGATAGATTATACTAAAGTAATTGCAAGTATGAGAGAGTACAAATTGGTTGT
GCTCGGCTCTGGAGGTGTTGGAAAGAGCGCCCTGACAGTGCAGTTTGTTCAAGGTATATT
CGTTGAAAAGTATGATCCTACGATTGAAGACAGCTACAGGAAGCAAGTGGAAACGGACAA
CCAACAATGTATGCTGGAAATTTTGGACACTGCTGGCACGGAACAATTTACAGCAATGAG
GGACTTGTATATGAAGAACGGGCAAGGTTTCGTGTTAGTTTACAGCATTACGTCGCAATC
CTCCTTCAATGATCTACAAGATTTGAGAGAACAGATTTTGCGTGTCAAAGACACAGATGA
TGTCCCCATGGTTCTTGTGGGAAATAAATGTGACTTGGAAGGCGAGAGAACGGTAGGAAA
GGATACAGGCAGTCAACTGGCTAGACAGTGGAACAACTGCTGTTTTCTGGAGACATCAGC
TAGGCAAAAAATCAATGTGAACGAGATATTTTTTGATATCGTCAGGCAGATTAATCGCAA
AACCCCAGAGCCAAGAAAGAAAAAAAAGAAAAGCAAAGGCTGCATTTTATTCTTTAACCC
ATCACCTCTTCTACCACCCCTAATGTACTTCCACGGCAACATCAATTTCCTTTATTTTAC
CATTTTCCTTACTTCTCTTGGTTTTTTCTTGTTAATATCTCCAATCACTTAAAATTGCGA
GAGCCTGTGAGGGGATACGATTATTCGAACGCACGGTAAGTGTAAAAAGATATGGCACCA
TCCTGCAACATTGATCAGTTATGTAGGATGCTTGGAACAGGCAAAGTCTTTTCAAAAACA
TTTTAGGCAGTGCCATCATTACGAAAGGTTATTCATCTACCTGCTAGTATCTGAATTTCT
ATATTTGACACCTCCAATACGCAGGTTTTTTTCGAGCTTGTTCAGCAAATAAACTCGAGC
AATCCAACCCCGACCACCGAGGATGGTATCTGTTCGAACTGCGTCATCCTATGACGTGGT
CGACGCGCTACCTAAAACGACACACTCTCATTACCCATTAAAAAAATTTAATAACAAACA
ACAACCATTGAAACTTCGAGCATTACCAGACGGTGAGTGGTGGCATGCATTCTCGCGATT
GGGTATAATCATGTATGGTTTTATTTACTTGATCTGGAGAAAAAAGCAAATTTAATAAGA
GTCGACTAACCATAATGCCAAAGAAAACGCTTAGCGCATGAGTATATGTTCACTTGTCTT
TGATAAATGCAGCGTTGGCGTAGGCATTTTACGCTGGCGTACAACGTTGTCGTACTGAGC
AGTCCATGGTGAATGATCCCAGAATCAGCATGTCCGGGATCAGTATTCTTTTTTGCTTGT
TTTTGATGGCAAAGGCAATGTTACAATGTTGATTACTATTGCAGTTATTGCTGAGCACAT
CTTTATGTTCCTTACATGAGTTGTAATTAGTTTCTGTTGTTCTGTTTGTTCTTCGAAAAA
GAATGCTAACCCAATCGAAAAATCATTTAAATTCTTTTTTTGATTTGACCTGTTTATTAC
TGGAGAAACTAAAATCACTAGTCCAGTCAGCCTCTACTACGGACCTGAGTCGAGTCGTTT
TTTTATACTTTTGCCGACTTTCGGAGAGCTGTTTGATCACACCGAGACTCCGGTCGAGTC
TAAAGTGAACTGTGCGAACTGAGATAACCTAAAACAAGGTTAAAATAACAATGCCTCAGT
CATTAGGCCAAGTAATGGTAACCTTTATACCAAGCACATGAAATGTTCTTGAATGATATA
TGTGCTATTCAACCATAACTACAACATGGAATTCAATCCACCATTAGTTCTTTGGACTGG
ATAATGTTATTGAGAATTGACAATTAGGAATACCTTATTGTCTTATAATATAATGAACTT
GGGTTAATAAATTTGTAAATTGAACTATAGTACTAGAGTGTAAAACAATGTTAATTGTAA
CCTAACTTCAGATCTATTACTCAGCTTGATAGTTGGTATGAGGACATGCAATTTGAGAAT
CCTTACAAGCAATTTAACTCTGCTAATCTAGAGATGTTTAAGAATAGTCAAAACTTGGGG
GGAATTCACTTTTTTGCCGAGAATGTCTGCCACCGCTCCTGTTGCTGGTGCCATTGCTAC
ACCAGGTTGTGTGGATACAGAAATGCACTTGCTGCAAAATCATAATGGATAAATAGCTAA
CTCACATTTAAAGTATTGAACTGTGATGCTCACTAATCGACAATTTTTATTATTTCGATT
TGGC

InterProScan

ProSiteProfiles
Small_GTPase_Ras (IPR020849) - T[9-194] 45.638
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[11-168] 1.0E-32
PANTHER
Small_GTPase_Ras (IPR020849) - T[11-194] 6.3E-108
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[12-175] 7.83E-53
Pfam
Small_GTPase (IPR001806) - T[15-176] 3.0E-57

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAP1B_HUMAN 87.709 % 329 2.44E-116
RAP1A_HUMAN 88.235 % 315 1.56E-110
RP1BL_HUMAN 86.592 % 325 1.7E-114