- Transcript 'Boleac.CG.SB_v3.S12....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S9.g12329.02.t
Possible name(s)
DLG4; GRIP1; GRIP2
Gene model
Location
S9 [165,112 / 174,036]
Amino acid sequence
Length: 1,032
>Harore.CG.MTP2014.S9.g12329.02.p
MPFKRPVCLASPDTADDKESSKENDLQIVPVQEVEIPELERGSCRVILHKKEKVGLGLTI
AGGKDKDSRPKVSNMRSGGIASMCDRLQVGDYITAVNGIRTSKMKHAEVISLLKNVGETV
TLDVEYHLPPITVCTASITQKSVDVILKTENNSSFGFVLRGGFHSDRMKSRSHVVTFIRE
GSHTDKESVLKAGDRIKFINSKPIHNATLEEAYEVIEKFPDECTFTIEYDVSVMDAVKNA
SGPLLVEVSKAAGSNLGVVLTVSMHNGKHCICIGGITPASIAERCGALNVGDRILSVDGI
ALDMSTMSLQDSEDFLKSSSDHIRLEILPVSQALRAIKYPTALSSARSLSALNSSSYMHP
HTMSTTSTLYRDGPSSRWARRRNFSRYCSSAVSLASKDYCSSNQVVHAETVEVSLLMADD
DVMLGNMHSACFGIQLQGGVFATEVLISPPSIASIESGSPAEKCGLIQSGDRLVSVNGCN
TENETLAEVNQMLQDALEIGQVYLVIEFDVAESVVPSCGTFHVKLPKRKNMELGIVINTA
GPSKEPLYISEVKQGSVAHRTGILQAGDRLLAVDGMRLDATSTIEDAMALLNCAENVVRL
KIKKEDDYSDGEGTNAPVIYTVELKKNGGSLGITIAGNEDIMHPIVISGLIPNGVASKTG
AIHKGDQILSINKISLKKKPLSEAVRLLQTAGDTVALKIKKSPHDDSHSSSPGFSNVEEE
DIQNYSSEKASSQENLLSPETDRSQGDTPSRNTSSITGGETTDVDYKSVGRIAPAGASSA
ETSKSWEKSGQDSSLTPDNYMRMEKMFQDTRSEYGAGLRHSETWGPRYNNRFRMRQQQHS
NNVYPTNDWQRALEGLQSVGQSSEIMKDLEESIMSTSKLNISDSAVMDTRPHFQQTRSVS
MSRMEPQIKQAVPSMLPLGPSVQLFKVTLVKSNKFENFGFSLSDGQLEHGVFVHSTHQGG
PAYKAGLRPYDRILQVNGVPTREFDCRQAIPLLTRSGNFIELVIARNPCVSVARHQLPLL
APPIDVPSFLYK
Nucleotide sequence
Length: 4,138
>Harore.CG.MTP2014.S9.g12329.02.t
GTTCCTTGTTAGGTTTATGAAATAAACAGATTTATAACGTGCTACATCACATATTGTATT
TTTTTATGGCTTGTAGTAGAGAGAAGACACACATGTTGAATGGATTCTAAAAATTCCACG
AACTTACTCGGCCGTAAAGAATACAGTGAGAGCACTGAGGTCCTGTTGTGTTAGCATAGG
AAGTTTAGGAAACTCGCCGTCTGGGTAGTTAAATTTGATTGCGTGAGTCACTAGCTTTGC
AAATTGGAGGTGAAATTCAAATGGATTGCGGTTTTCTTGCTACTATTGATTCTCGCAGGT
GATTAAAATGCCGTTCAAGAGACCGGTTTGTTTGGCATCTCCGGACACTGCAGATGATAA
AGAGTCTTCGAAAGAGAATGATCTGCAGATTGTTCCTGTTCAAGAAGTGGAGATCCCTGA
ACTTGAACGTGGATCATGCAGAGTTATCCTGCACAAGAAAGAAAAAGTTGGACTTGGACT
GACGATAGCCGGCGGAAAAGACAAAGACAGTCGACCGAAAGTATCTAACATGCGTAGCGG
AGGTATTGCTTCAATGTGTGATCGACTGCAGGTCGGAGACTATATAACGGCCGTCAACGG
AATAAGAACAAGTAAAATGAAGCATGCCGAAGTTATAAGCTTACTAAAAAATGTTGGCGA
AACCGTGACACTGGACGTTGAATATCATTTACCTCCTATCACCGTTTGTACTGCAAGCAT
TACACAGAAATCTGTAGATGTTATTTTGAAGACAGAAAATAACTCATCCTTTGGCTTTGT
GCTCCGCGGTGGATTCCATTCGGACAGGATGAAATCGAGGTCGCATGTTGTTACGTTTAT
TCGAGAAGGAAGTCATACTGACAAGGAAAGTGTACTCAAGGCAGGAGACAGAATAAAATT
CATCAATTCCAAACCAATACACAACGCAACTCTCGAGGAGGCTTATGAAGTCATAGAAAA
ATTTCCTGATGAATGTACCTTCACGATTGAATATGATGTGTCAGTAATGGATGCTGTTAA
GAATGCTTCAGGTCCTCTGCTTGTGGAAGTTTCAAAGGCTGCAGGCTCTAATCTTGGCGT
GGTTCTGACAGTGTCTATGCACAATGGAAAACACTGCATTTGTATAGGTGGTATAACACC
AGCAAGTATTGCAGAAAGGTGCGGTGCTTTAAATGTTGGGGATCGTATTCTCTCTGTTGA
TGGTATCGCCCTGGACATGTCAACGATGTCATTGCAGGATTCGGAAGATTTCTTGAAGTC
TTCTTCAGATCATATCAGACTGGAAATTCTTCCTGTTTCCCAAGCGCTACGAGCAATCAA
ATATCCAACAGCTTTATCGAGTGCTAGGTCATTATCTGCATTGAATAGTTCAAGTTATAT
GCATCCGCATACCATGTCCACGACATCAACATTGTATAGAGATGGTCCAAGCTCCAGATG
GGCTAGGAGGAGGAATTTTTCAAGATACTGCAGCAGCGCTGTTTCTTTGGCTTCGAAAGA
TTATTGTAGCAGTAATCAAGTGGTTCATGCAGAAACTGTCGAAGTTTCCCTTCTAATGGC
GGATGACGATGTAATGCTAGGGAATATGCATTCAGCTTGCTTCGGAATACAGCTCCAAGG
TGGAGTATTTGCAACAGAGGTCTTGATTTCTCCCCCGAGTATAGCATCTATTGAAAGTGG
AAGCCCAGCTGAAAAGTGTGGACTGATTCAGTCAGGTGACAGATTAGTTTCAGTGAATGG
CTGCAATACAGAGAATGAAACTTTGGCTGAAGTTAATCAAATGCTACAAGATGCGTTGGA
AATTGGACAGGTATATTTGGTCATTGAATTTGATGTGGCAGAATCAGTCGTGCCGAGCTG
TGGAACGTTTCATGTCAAACTTCCGAAGAGAAAGAATATGGAGTTGGGTATTGTAATCAA
CACTGCAGGTCCTTCCAAAGAACCGTTATACATTTCCGAAGTAAAGCAAGGCTCTGTTGC
TCACAGAACGGGCATCTTGCAAGCGGGTGATCGCCTCTTGGCAGTAGATGGTATGAGATT
AGATGCAACATCTACTATCGAAGATGCTATGGCTCTTTTGAATTGTGCTGAGAATGTTGT
CAGGCTAAAAATCAAGAAAGAAGATGACTATTCTGATGGGGAAGGAACAAATGCGCCTGT
TATCTATACGGTCGAACTAAAGAAAAATGGAGGAAGTCTCGGCATCACCATAGCGGGAAA
CGAGGACATCATGCATCCCATTGTCATTTCTGGTCTCATACCTAATGGCGTTGCTTCTAA
AACTGGTGCGATCCATAAGGGAGATCAGATACTCAGTATAAATAAGATTTCATTGAAAAA
AAAACCCTTGAGTGAAGCTGTGAGGTTGTTGCAGACCGCGGGCGACACAGTAGCCTTGAA
AATCAAAAAGTCTCCGCATGACGATTCACATTCTTCTTCACCAGGTTTTAGTAACGTTGA
AGAGGAAGATATTCAGAATTACTCTTCAGAAAAAGCCAGCAGTCAAGAAAACTTGCTGAG
TCCCGAGACTGACCGATCTCAAGGAGATACTCCCTCAAGGAACACTTCTTCCATCACTGG
GGGAGAGACGACGGATGTGGATTACAAAAGCGTGGGCCGTATTGCACCTGCCGGTGCCTC
CAGTGCCGAAACGTCGAAGTCGTGGGAGAAATCAGGCCAGGACAGCTCACTTACACCGGA
CAATTATATGAGGATGGAAAAAATGTTTCAAGACACTCGTTCAGAATATGGGGCAGGGCT
TAGACATTCAGAAACTTGGGGACCGAGGTACAATAATCGATTCAGGATGCGACAACAACA
ACATAGCAATAATGTATATCCAACCAACGATTGGCAAAGAGCTTTGGAGGGTTTGCAGTC
TGTTGGGCAATCGAGTGAGATAATGAAAGATCTTGAGGAATCCATAATGAGCACCAGTAA
ACTGAACATATCTGATAGTGCGGTGATGGATACCAGACCTCATTTTCAACAAACTAGAAG
TGTGAGCATGTCCAGAATGGAACCACAAATAAAGCAAGCAGTGCCTTCCATGTTACCACT
CGGACCATCAGTGCAGTTATTCAAGGTTACCCTGGTCAAAAGCAATAAGTTTGAAAACTT
TGGATTTTCTTTATCCGATGGCCAGCTGGAGCATGGAGTGTTCGTCCATTCAACTCATCA
AGGCGGACCTGCATACAAAGCAGGTCTAAGGCCCTATGACAGAATACTGCAGGTTAATGG
AGTGCCGACTCGAGAATTCGATTGCCGTCAAGCCATCCCTCTTCTGACTCGTTCAGGAAA
CTTTATTGAACTCGTAATTGCGAGAAACCCGTGCGTGTCGGTGGCGAGGCATCAACTGCC
TTTGCTGGCTCCACCGATCGATGTGCCAAGCTTTTTATACAAGTAATAAACTCTTGCCAT
TAAGACGAAAAATCTTGCTGCCACAACATGGTACTACTATTTTTCCTATTTAAATAACTT
GAGCAGTATTCTTATACTTTTTTCTAATCATGCATTTTTTCCTTTGACTTTTAACTTCAC
TAACTTGCATGCATATTAGATGGTACTGTGGGAGAGACGTCCTTAAAAAGAAAAACACTT
TTATTTCCTGAAAACATTTTCCATTGTTTGGTTCACAGATAGGATTTAAAAAAAATCTAC
TAAGTACATATAGAAAGAACAATTGTATTTCTGTAATTCAAACATCTTTATGAACCTGAA
GGTTAATGAATTTTCCCAGAGCAAATTCTTCTTATCACACAAAGGATGTTCTCATAATAG
TTTGTCATAGAGCTGTGCCCATTCTCATATTGCCTTTCAAAGACACTTTGTGGGTCATAG
TTTGAGTTAGCAGGGTACAAGTTGCATGTTCAAATGCCAATTCACCTTCTTCCCCTGAAA
CAGCATGAAAATATTTTAGTATTATATATTTCAAAATAAAAATTATCCTTGAAATCAACA
AATGCAAGCAAGGCATGTCCAGCAGCTTGCCTGACGTCAAACTGTTCGTCGCTGTGGCAC
AGGTATGCAAGTTGAGGAATGCATTCCTTAGCACCGAGAAGTCCAAGTGCACAACAGGAA
CATTGTCTGTCTCTTTTCGACCTAGATTCCAGTAATTCTACCAGGGAGATAAAAGCCT
| PANTHER |
GRIP2 (IPR030029) - T[24-340] 4.8E-255 - T[373-1018] 4.8E-255 |
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[37-133] 1.97E-22 - T[128-230] 1.28E-14 - T[230-333] 1.84E-15 - T[429-506] 6.57E-15 - T[506-607] 6.7E-16 - T[617-703] 3.02E-22 - T[911-1010] 1.97E-20 |
| ProSiteProfiles |
PDZ (IPR001478) - T[45-128] 17.973 - T[144-231] 13.933 - T[245-331] 15.802 - T[412-496] 12.908 - T[522-606] 16.446 - T[621-703] 19.642 - T[926-1008] 17.551 |
| Pfam |
PDZ (IPR001478) - T[46-124] 4.2E-12 - T[145-227] 2.1E-7 - T[247-328] 1.6E-8 - T[432-506] 4.1E-8 - T[523-602] 4.9E-10 - T[622-700] 7.8E-14 - T[928-1004] 8.3E-11 |
| SMART |
PDZ (IPR001478) - T[54-128] 7.3E-16 - T[153-231] 4.8E-6 - T[254-331] 1.0E-10 - T[430-510] 2.7E-11 - T[531-606] 5.5E-13 - T[629-703] 2.9E-18 - T[936-1008] 3.3E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRIP1_HUMAN | 41.59 % | 723 | 0 |
| GRIP2_HUMAN | 41.832 % | 688 | 0 |