Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g53191.01.t

Possible name(s)

KCNIP4; NUCB1; NUCB2

Gene model

Boschl.CG.Botznik2013.chrUn.g53191

Location

chrUn [324,793,440 / 324,794,844]

Sequences

Amino acid sequence

Length: 467

>Boschl.CG.Botznik2013.chrUn.g53191.01.p
MLLLISVCSIEGPPAPTKTTLAPSPEEESQETSFGLYYEQYLQEVVKLLESDEDFRNAME
KADFDDIKNGKLSGEVQKIPGEIREKLDALKKEELSRLRRVLRAKMDAEKGIKPGSYLKN
IAQHLDSANPHSFGPQDLTNLIKAATEDLENYDTKRHADFKQYEMMKEIKRDAKLEQMSD
AEKEKEKKAYEEMRQKHNDHPKVNHPGSKAQLDEVWKEKDGLTEEEFDPKTFFMLHDVNG
DGTLDQAELESLFDRELGKVYDVKNPEDDMVERDEEQRRMREHVTKEVDKDGDGLVTIDE
FLQYTKTDDFRNPDADSYKSVDEMIEEEEVYTAEELEEFRQMIADHEKELADKXEXIKNK
SASIDVMKKEVAEREGKLGPSPSEDEVDSIEDKKQEIADEEGALDDLKVDADEHEXELED
MKEELREQXEAVKXDXGGXAVKXDEEVXXXLLDPGMXQGLEMXKKXE

Nucleotide sequence

Length: 1,404

>Boschl.CG.Botznik2013.chrUn.g53191.01.t
TGCTACTCCTCATTTCGGTCTGTTCCATAGAAGGCCCGCCTGCCCCGACAAAGACAACGC
TAGCACCTTCCCCCGAAGAAGAATCACAAGAGACATCTTTCGGACTTTATTATGAGCAGT
ACCTCCAGGAGGTGGTGAAATTACTGGAGAGCGATGAAGATTTTCGTAACGCGATGGAAA
AAGCGGATTTCGACGATATCAAAAACGGAAAACTGAGCGGCGAGGTGCAGAAAATACCGG
GCGAAATCCGTGAAAAATTAGACGCTTTGAAAAAGGAGGAGCTGTCGCGCCTACGTAGGG
TGCTGCGCGCCAAGATGGACGCCGAGAAAGGAATCAAGCCGGGGAGCTACCTGAAAAATA
TCGCGCAACACTTGGACAGCGCTAACCCGCATTCTTTCGGACCGCAAGACTTGACCAACC
TCATCAAAGCGGCCACCGAAGACTTGGAAAACTACGACACAAAGCGGCACGCAGATTTCA
AGCAGTACGAGATGATGAAAGAAATAAAGCGCGACGCGAAATTGGAGCAAATGAGCGACG
CAGAGAAAGAGAAAGAAAAAAAGGCATATGAGGAGATGAGACAGAAGCATAACGACCACC
CGAAAGTCAACCATCCCGGCAGCAAAGCCCAGCTTGACGAAGTGTGGAAAGAAAAAGATG
GTCTTACGGAAGAAGAATTCGATCCCAAAACGTTCTTCATGCTCCACGACGTGAACGGAG
ATGGAACCCTCGACCAGGCTGAGCTCGAGTCTCTGTTCGACCGAGAGCTCGGAAAGGTGT
ACGATGTCAAAAACCCAGAAGACGACATGGTCGAGAGAGACGAAGAGCAACGGAGAATGC
GCGAGCACGTCACGAAAGAAGTAGACAAGGACGGAGACGGGTTGGTCACTATAGATGAAT
TTTTGCAGTACACAAAGACTGACGACTTCCGCAATCCGGACGCGGACTCTTACAAATCAG
TCGACGAGATGATTGAAGAGGAAGAGGTTTACACTGCGGAGGAACTGGAGGAGTTTCGGC
AAATGATTGCGGATCACGAAAAGGAGCTTGCGGACAAGCTNGAGNAAATCAAGAACAAGT
CGGCTTCTATTGACGTGATGAAGAAAGAGGTTGCGGAGCGCGAAGGTAAGCTTGGTCCTA
GCCCGTCGGAAGACGAGGTGGATAGTATCGAGGACAAGAAGCAGGAGATTGCCGACGAGG
AAGGGGCGTTGGATGATTTGAAAGTGGACGCGGACGAGCACGAGGANGAGTTGGAGGACA
TGAAGGAGGAGTTGAGAGAGCAGGANGAGGCGGTAAAANGTGACGGNGGTGGTANGGCGG
TGAAAATNGATGAGGAAGTCCANGANCCNTTGCTGGACCCCGGAATGGNTCAAGGGTTGG
AAATGGANAAGAAGACNGAGTGAA

InterProScan

SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[214-306] 2.01E-16
ProSiteProfiles	EF_hand_dom (IPR002048) - T[224-259] 10.859 - T[286-311] 9.436
Pfam	EF_hand_dom (IPR002048) - T[230-305] 1.1E-11
ProSitePatterns	EF_Hand_1_Ca_BS (IPR018247) - T[237-249] . - T[289-301] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NUCB2_HUMAN	45.628 %	274	6.69E-88
NUCB1_HUMAN	50.515 %	263	7.79E-83