- Clone 'ma152n23' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g53777.01.t
Possible name(s)
ITGB1; ITGB5; ITGB6
Gene model
Location
chrUn [327,559,580 / 327,564,363]
Amino acid sequence
Length: 218
>Boschl.CG.Botznik2013.chrUn.g53777.01.p
MEVXGCGWCEDPTYDDNPNIIVSRCEMAENLAEGDGKCKSIINPPSKIDPVVDEEHSSVG
ESDVGKATQLRPQVVSAQLRPGAPSLIEVSYKQAEDYPVDLYYLLDLSSSMQDDLKSLRK
LGKKLGDTMGNITKNFRLGFGSFVDKTVMPFISTVPAKLLNPCLPTSSCVPAYSFHNDLP
LSLEINDFVDKVNKVNHSSNLDSPEGGFDAMMQAIVCT
Nucleotide sequence
Length: 654
>Boschl.CG.Botznik2013.chrUn.g53777.01.t
TATGGAGGTAGCNGGATGCGGTTGGTGTGAAGACCCGACTTACGATGACAACCCAAACAT
TATTGTTTCTCGATGCGAAATGGCCGAGAACCTTGCTGAAGGAGACGGGAAATGTAAATC
TATCATCAATCCGCCATCAAAGATTGATCCAGTTGTCGACGAAGAACACTCCAGCGTCGG
AGAGTCCGATGTAGGCAAAGCAACTCAACTGCGACCCCAAGTAGTTTCCGCACAACTTCG
GCCAGGAGCACCCAGCCTGATCGAGGTCTCGTACAAGCAAGCCGAGGATTATCCCGTCGA
CCTGTATTACCTTCTGGATTTATCGAGTTCTATGCAAGACGATTTGAAATCCCTGCGAAA
GTTGGGAAAAAAACTCGGAGACACGATGGGAAATATAACGAAAAATTTCCGGCTCGGCTT
CGGGTCGTTTGTCGATAAAACCGTGATGCCTTTCATTTCAACTGTCCCAGCCAGGCTTTT
GAATCCGTGCTTGCCGACCAGCAGCTGCGTCCCGGCGTACAGCTTCCACAACGATCTTCC
ACTGTCGCTGGAAATCAACGATTTTGTGGACAAGGTCAACAAAGTGAACCACTCTTCCAA
CCTGGATTCTCCGGAGGGAGGTTTCGACGCCATGATGCAAGCTATCGTGTGTAC
| SMART |
Integrin_bsu_VWA (IPR002369) - T[2-218] 8.4E-16 |
| PRINTS |
Integrin_bsu (IPR015812) - T[25-44] 2.5E-40 - T[69-82] 2.5E-40 - T[97-115] 2.5E-40 - T[137-156] 2.5E-40 - T[169-188] 2.5E-40 - T[202-218] 2.5E-40 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[94-218] 3.7E-55 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[94-218] 9.64E-39 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[97-218] 3.0E-50 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB6_HUMAN | 41.121 % | 174 | 1.88E-50 |
| ITB5_HUMAN | 43.519 % | 177 | 1.96E-51 |
| ITB1_HUMAN | 43.318 % | 176 | 4.55E-51 |