Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g53811.01.t

Possible name(s)

SESN1; SESN2; SESN3

Gene model

Boschl.CG.Botznik2013.chrUn.g53811

Location

chrUn [327,725,620 / 327,727,405]

Sequences

Amino acid sequence

Length: 594

>Boschl.CG.Botznik2013.chrUn.g53811.01.p
MMPAGVAEDDEISDIGASSFLPTYEDTQRQFILLTSTDQATRETALDALREDIWSLVESL
TQKNGISLENANASNGQQKSCVLSASNSRNPSGDLGTFGTPKQVLNHLLGSFLRLSMWCP
YEDVRLGCKETLMYLKQSGINVPKALVKEPSSFIPHSHIPPVDTDDEEISSLYVESYAQT
CRLEHMVLVMGMHPQYLKEFLAVNMHLLKSDGALPYCYRSYIGILAAARHKCKYLVRLME
TDFVVAGGDPQWLCGIKHACPKLRALSDLNKLLAHRPWLVNETHIERLCKGGNGWQWSQS
ELVQAIILLCHFHSLSIFCHGTGVNLELDHVKSNFYDFAISPNGNRSPPSFDLDGDNSSN
DGNEQGNDNDIEALMQKMRQIDENDSEIMTKEELSRLFESQKLEAYSHNLGENMYDNNKT
DKSYCLKYIDDAEFSYEEFAKRSDSNEIPTFKAMDFNWQDHAYSLVNTYYHPVGDMLDSK
FHTAYNMTYNTLATKEHVDTSKLRRAIWMYIHCTCGIMFDDYNYGEVNELLERSLKNFIK
TASCYPECTTKQIYDEFWRQFRHSEKVHVNIVLLEGRFQVELLYALRAVTEYIK

Nucleotide sequence

Length: 1,785

>Boschl.CG.Botznik2013.chrUn.g53811.01.t
TGATGCCTGCCGGCGTAGCGGAAGATGATGAAATATCTGACATCGGCGCGTCATCTTTTC
TACCGACGTACGAAGACACCCAAAGACAATTCATTCTGCTAACCAGCACCGATCAAGCGA
CACGGGAAACCGCTTTGGATGCTCTACGAGAGGATATTTGGAGTTTAGTCGAGTCTTTGA
CTCAAAAGAATGGAATAAGCCTTGAAAACGCCAACGCTTCAAACGGCCAACAAAAATCAT
GTGTCTTATCGGCAAGCAACTCGCGAAACCCAAGCGGCGATCTCGGTACATTCGGGACTC
CAAAGCAAGTATTGAATCATCTATTAGGATCATTTTTGAGACTCAGCATGTGGTGTCCAT
ACGAGGACGTGCGGTTGGGGTGTAAAGAAACTCTGATGTATTTGAAACAGAGCGGTATCA
ACGTGCCAAAAGCTTTGGTGAAAGAGCCAAGCTCTTTTATCCCGCATAGCCATATTCCAC
CTGTCGATACGGATGACGAAGAAATATCCTCCTTATATGTCGAGAGTTACGCACAGACTT
GCCGACTTGAACATATGGTTTTAGTAATGGGCATGCATCCTCAGTATTTAAAGGAATTTC
TTGCCGTGAACATGCATCTTCTCAAAAGCGATGGTGCCTTGCCTTACTGCTATAGAAGTT
ACATTGGTATTCTTGCCGCCGCCCGGCATAAATGCAAATATTTAGTGCGCTTGATGGAAA
CGGACTTTGTGGTAGCTGGAGGCGACCCGCAATGGCTGTGTGGTATCAAACACGCCTGTC
CTAAATTAAGAGCGCTGTCGGACTTGAATAAGTTACTTGCACATCGACCGTGGCTTGTCA
ACGAAACACATATCGAAAGACTCTGCAAAGGAGGGAATGGCTGGCAATGGTCTCAATCCG
AACTTGTGCAGGCCATTATTCTGCTCTGTCATTTTCATAGTTTGTCCATATTTTGCCACG
GCACCGGCGTCAACCTTGAATTGGACCATGTGAAGTCCAATTTCTACGATTTTGCAATAA
GCCCAAATGGCAACCGATCGCCTCCGAGTTTCGATCTTGATGGTGATAATTCTTCAAACG
ACGGTAATGAACAAGGAAACGACAACGATATTGAGGCCTTGATGCAAAAGATGCGACAAA
TCGATGAGAATGACTCTGAAATCATGACCAAAGAAGAATTATCCCGGCTGTTTGAATCAC
AAAAACTAGAAGCGTACAGCCACAATCTCGGTGAAAATATGTATGACAACAACAAAACTG
ATAAGTCTTACTGTCTAAAATACATTGACGACGCCGAGTTTAGTTACGAAGAGTTCGCAA
AACGAAGTGACAGTAACGAAATCCCCACATTCAAAGCAATGGACTTCAACTGGCAGGATC
ATGCGTATTCATTGGTGAATACATACTACCATCCTGTCGGTGACATGCTCGACTCGAAAT
TCCATACCGCTTACAATATGACTTATAATACTCTTGCCACTAAGGAGCACGTTGACACCT
CCAAACTGCGCCGCGCTATTTGGATGTACATCCATTGCACTTGCGGAATCATGTTTGACG
ATTACAATTATGGTGAAGTTAACGAGCTATTAGAAAGATCATTGAAAAATTTTATTAAAA
CCGCATCATGTTACCCGGAATGTACAACTAAGCAAATTTATGATGAATTTTGGAGGCAAT
TTCGCCATTCCGAGAAAGTACACGTCAATATTGTTTTGTTAGAGGGACGGTTTCAGGTTG
AGTTATTATATGCCCTGCGTGCGGTAACTGAATATATAAAATGAA

InterProScan

PANTHER	Sestrin (IPR006730) - T[46-81] 1.5E-153 - T[134-593] 1.5E-153
Pfam	Sestrin (IPR006730) - T[150-592] 1.4E-162
SUPERFAMILY	AhpD-like (IPR029032) - T[153-329] 8.16E-26
Gene3D	AhpD-like (IPR029032) - T[171-332] 3.5E-8
ProSiteProfiles	EF_hand_dom (IPR002048) - T[369-404] 8.321

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SESN1_HUMAN	46.074 %	420	6.07E-142
SESN3_HUMAN	42.292 %	417	7.48E-141
SESN2_HUMAN	44.444 %	379	2.71E-126