Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 631

>Boschl.CG.Botznik2013.chrUn.g58757.01.p
MASLYVGDLHYDATEAMLYEKFSQAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL
DTMNFDPIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCK
VSCDMNGSKGYGFVHFETEEAAQRAIEKVDGMLLNDKKVYVGKFISRSERHKQIGERMKN
FTNVYIKNFGENLDTEKLREMFEAYGPLKSCVVMADQEGKSRGFGFAAFENHEDAQKAVS
ELNGKDIGGECIYVGRAQKKSERMAEIRQRYERQKQEQIQRYQGVNLYVKNLDDTIRDDS
LREAFQAYGTITSAKVMTDGERSKGFGFVCFSAPDEATKAVTEMNGRIVGTKPLYVALAQ
RKEDRKAHLATQYMHRMSNISGVRVAHPNQLMGQSFQSGAPYYMPALAGTGNRYVPGQII
RTASRWQATAPSGFPMQNIRQPHAGGPIRPVTAPARNGMQQQPHRLDMIPGRQQPMYMQP
NRQAFKYNQSVRNPASIASGVGQPQHAQQQAEAAQPAVHVQGQEPLTPSALAAAPPHEQK
QMLGERLYPIIESEHPSLASKITGMLLEIDNSELLHMLESRDSLKAKMEEAVAVLQAHQA
KVAAATRQAPAQAPAQVNGGAPNAVAVGGQE

Nucleotide sequence

Length: 1,896

>Boschl.CG.Botznik2013.chrUn.g58757.01.t
GATGGCGTCCCTGTACGTCGGCGACTTGCATTACGACGCTACCGAAGCCATGTTGTACGA
GAAGTTCTCTCAAGCTGGCCCCGTTCTGTCGATCCGAGTGTGCCGCGACATGATCACCAG
AAGATCTCTCGGTTACGCGTACGTCAACTTTCAACAACCGGCGGATGCGGAACGCGCGTT
GGACACCATGAACTTCGACCCGATCAAAGGACGTCCGATCAGAATCATGTGGAGTCAACG
CGACCCCGGCCTGAGGAAGTCTGGTGTCGGAAATATTTTCATCAAAAATCTGGACAAGTC
CATCGACAACAAGGCACTGTACGATACTTTCTCCGCGTTCGGTAATATCTTGTCGTGCAA
AGTGTCTTGCGACATGAACGGCTCGAAAGGGTACGGTTTCGTGCATTTCGAGACGGAGGA
AGCGGCGCAGCGCGCTATTGAAAAAGTGGACGGCATGTTGCTCAACGATAAAAAGGTGTA
CGTCGGAAAGTTCATCTCCCGCTCTGAACGCCACAAGCAGATCGGGGAACGCATGAAGAA
TTTCACCAACGTGTACATCAAGAATTTCGGAGAGAATCTGGACACGGAAAAACTGCGCGA
GATGTTCGAGGCCTACGGCCCGCTTAAAAGCTGCGTGGTGATGGCAGATCAAGAAGGGAA
ATCTCGCGGGTTCGGTTTCGCCGCCTTTGAAAATCATGAAGACGCTCAAAAAGCCGTGTC
TGAACTAAACGGGAAGGACATCGGAGGAGAGTGTATCTACGTCGGACGCGCTCAGAAAAA
ATCCGAAAGAATGGCTGAAATCAGGCAGCGGTACGAGAGGCAAAAGCAGGAGCAGATTCA
GCGGTACCAAGGTGTGAATTTGTATGTCAAAAATCTGGATGACACCATCAGAGATGATTC
TTTGCGTGAAGCTTTCCAAGCTTACGGCACTATTACCAGCGCGAAAGTCATGACTGATGG
GGAACGATCGAAAGGATTCGGGTTTGTGTGTTTCAGCGCTCCCGATGAAGCGACGAAAGC
TGTCACTGAGATGAACGGACGCATCGTGGGTACCAAACCGTTGTACGTAGCTTTGGCGCA
GAGAAAGGAAGACCGTAAAGCGCATTTGGCGACGCAGTACATGCACCGAATGTCTAACAT
ATCGGGTGTGCGTGTGGCGCATCCTAACCAGCTGATGGGACAGTCGTTTCAATCAGGCGC
GCCGTATTATATGCCGGCGCTGGCCGGCACTGGTAACCGATATGTGCCCGGGCAGATTAT
CCGTACGGCTTCGAGATGGCAGGCTACGGCACCTTCTGGGTTCCCGATGCAGAATATCAG
ACAACCACATGCAGGCGGTCCGATTAGACCCGTGACCGCCCCGGCTAGAAATGGCATGCA
ACAACAACCGCACCGTCTCGATATGATCCCAGGACGTCAGCAGCCAATGTACATGCAGCC
TAACAGACAAGCGTTCAAATACAACCAGAGTGTACGCAATCCGGCGTCGATCGCGTCTGG
TGTGGGACAACCACAGCACGCGCAGCAGCAGGCAGAGGCGGCTCAACCGGCTGTCCATGT
ACAAGGGCAAGAGCCTCTCACCCCGAGCGCGCTCGCGGCTGCCCCGCCGCACGAGCAAAA
GCAGATGTTGGGCGAGCGCTTGTACCCCATCATCGAGTCTGAACATCCGAGCTTGGCTTC
GAAGATCACCGGGATGCTGTTGGAGATCGACAACTCCGAACTGCTGCACATGCTCGAGTC
CCGCGACTCGCTCAAGGCGAAGATGGAGGAGGCCGTCGCCGTGTTGCAGGCTCACCAGGC
TAAGGTTGCGGCTGCCACTCGACAAGCCCCCGCTCAAGCTCCTGCTCAAGTTAACGGAGG
TGCCCCGAATGCGGTAGCCGTCGGCGGGCAAGAATA

InterProScan

ProSiteProfiles	RRM_dom (IPR000504) - T[2-80] 17.66 - T[90-166] 16.773 - T[182-259] 18.973 - T[285-361] 18.24
TIGRFAM	PABP_1234 (IPR006515) - T[2-596] 2.5E-230
Gene3D	Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-83] 3.8E-25 - T[84-170] 4.8E-24 - T[171-267] 3.6E-25 - T[268-372] 9.9E-27
SMART	RRM_dom (IPR000504) - T[3-76] 4.1E-22 - T[91-162] 8.5E-23 - T[183-255] 5.2E-25 - T[286-357] 2.4E-23
SUPERFAMILY	RBD_domain_sf (IPR035979) - T[3-169] 4.89E-49 - T[181-365] 6.04E-48
Pfam	RRM_dom (IPR000504) - T[4-74] 3.5E-20 - T[92-159] 3.1E-19 - T[184-252] 3.3E-21 - T[287-354] 8.1E-18
SMART	RRM_dom_euk (IPR003954) - T[91-162] 0.87 - T[183-255] 3.6 - T[286-357] 3.4
SUPERFAMILY	PABP-dom (IPR036053) - T[468-606] 3.66E-42
ProSiteProfiles	PABP_HYD (IPR002004) - T[523-600] 21.356
Pfam	PABP_HYD (IPR002004) - T[529-595] 2.8E-28
SMART	PABP_HYD (IPR002004) - T[535-598] 1.1E-33