- Transcript 'KH2012:KH.L154.4.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g58758.01.t
Possible name(s)
ACTB; ACTG1; ACTG2
Gene model
Location
chrUn [347,009,707 / 347,010,596]
Amino acid sequence
Length: 229
>Boschl.CG.Botznik2013.chrUn.g58758.01.p
MEDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGQKDSYVGDEAQS
KRGILSLKYPIEHGIVKNWDEMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAIIRLDL
AGRDLTDYLTKILTERGYSLTTTAEREIVRDIKEKLCFVALDFDQEMNT
Nucleotide sequence
Length: 689
>Boschl.CG.Botznik2013.chrUn.g58758.01.t
CATGGAAGACGAAGTTGCTGCTCTCGTAGTTGACAATGGTTCTGGAATGTGCAAAGCCGG
TTTCGCGGGCGATGACGCACCACGGGCAGTATTTCCTTCAATCGTTGGTCGGCCCCGCCA
TGTGGGTGTGATGGTCGGCATGGGACAGAAAGACAGCTACGTTGGTGATGAAGCTCAGAG
TAAAAGGGGTATTTTGTCATTGAAATACCCAATTGAACACGGCATTGTGAAAAACTGGGA
TGAGATGGAGAAGATCTGGCATCATACGTTCTACAACGAACTTCGTGTCGCGCCAGAGGA
GCATCCCTGTCTGCTTACCGAAGCTCCCCTCAACCCAAAAGCCAATCGCGAGAAGATGAC
TCAGATTATGTTCGAGACATTCAATACGCCAGCGATGTATGTTGCTATTCAAGCAGTCTT
GTCCCTCTACGCTTCAGGGCGTACCACTGGTATCGTCATGGATTCTGGTGATGGTGTTTC
GCACACAGTACCCATCTATGAGGGATACGCTCTACCACATGCTATAATTCGTCTCGACCT
TGCTGGCCGTGATCTGACGGATTATCTCACAAAGATCTTGACAGAACGCGGTTATTCGCT
AACGACTACAGCTGAGCGTGAAATCGTCCGTGACATCAAGGAAAAATTATGCTTTGTTGC
CCTTGATTTTGATCAAGAAATGAATACGG
| PANTHER |
Actin (IPR004000) - T[1-229] 1.2E-155 |
| Pfam |
Actin (IPR004000) - T[3-225] 4.5E-81 |
| SMART |
Actin (IPR004000) - T[5-229] 1.5E-75 |
| PRINTS |
Actin (IPR004000) - T[26-35] 1.2E-45 - T[49-60] 1.2E-45 - T[61-83] 1.2E-45 - T[115-128] 1.2E-45 - T[140-159] 1.2E-45 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[53-63] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[104-116] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 93.45 % | 456 | 2.14E-163 |
| ACTB_HUMAN | 93.45 % | 454 | 5.49E-163 |
| ACTH_HUMAN | 89.474 % | 436 | 9.09E-156 |