- Molecular Tool 'Raf mRNA (Tokuoka 2018)' >
- Transcript 'Mooccu.CG.ELv1_2.S37...' >
- Transcript 'Mooccu.CG.ELv1_2.S47...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g59208.01.t
Possible name(s)
ZEB1; ZEB2; ZNF232
Gene model
Location
chrUn [349,492,635 / 349,494,376]
Amino acid sequence
Length: 402
>Boschl.CG.Botznik2013.chrUn.g59208.01.p
VKAEFSRYSERLQTRPVVTDSYGSRTHNSFSEGDFGTRPFANMDDSFLPTMVPSGYNPGI
FSRRGRPRKRPYDTDAHSRFQGPFTAMEALMHESSAKYRRSTFSQKPFPSASSVELSRLA
DRIKGRLPSNQMLYKCDICEKSFQKQSSLTRHKYEHTGKRPHHCNECPKSFKHKHHLIEH
QRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYAYCKPEDTMMQELRQQLKKSNGDGHVM
ANLSGSFSHTSPVKAPTETAMQIPQKTKPMTTESGRLSPAKHADQQQNHCLRKSDFDSTK
ITDRQSGEDGRNTPVSRSSTDAVTSSPAPRNEGSPTIKEEFHADRSDDELDFADKSIKSA
TCHSPSSCSSDSMSSGSPPTPTKFPPNSHSIALATSNELQLH
Nucleotide sequence
Length: 1,210
>Boschl.CG.Botznik2013.chrUn.g59208.01.t
GTAAAAGCGGAGTTTTCCCGCTATTCCGAGCGATTGCAAACTCGTCCAGTAGTCACCGAC
TCGTACGGCTCCAGGACCCATAATTCATTCAGTGAGGGTGATTTCGGAACACGACCGTTC
GCAAACATGGACGACAGCTTTCTACCAACGATGGTCCCGTCCGGATATAATCCCGGTATT
TTCAGTCGACGAGGAAGGCCGAGAAAGCGCCCATATGACACAGACGCTCACAGTCGATTT
CAAGGCCCGTTCACAGCAATGGAGGCCCTAATGCACGAAAGCTCTGCCAAATATCGGCGC
AGCACCTTCAGCCAGAAGCCGTTTCCGTCCGCTAGCTCTGTCGAATTATCGAGGCTTGCG
GACCGGATAAAGGGACGGCTGCCCTCAAACCAGATGTTGTACAAGTGTGACATCTGCGAG
AAGTCGTTTCAAAAGCAAAGCTCGCTGACACGGCACAAGTACGAACACACCGGTAAGAGA
CCTCATCATTGCAATGAATGCCCGAAGTCTTTCAAACACAAACACCACTTGATCGAGCAC
CAGCGATTGCACAGTGGAGAGAAACCATACCAGTGCGATAAATGCGGCAAAAGGTTTTCT
CATTCCGGATCATACTCACAACACATGAACCATCGCTACGCCTACTGTAAACCTGAAGAC
ACTATGATGCAGGAGCTGCGCCAGCAGCTCAAAAAGTCCAATGGAGACGGCCACGTTATG
GCGAATTTAAGCGGGAGCTTTAGTCACACCAGTCCCGTTAAAGCACCCACCGAAACAGCC
ATGCAAATTCCACAGAAAACAAAGCCGATGACAACGGAATCAGGACGCTTGTCGCCAGCG
AAACACGCCGACCAGCAGCAGAACCACTGTCTGCGAAAGTCAGACTTCGATTCAACCAAG
ATAACCGATCGACAGTCTGGCGAAGATGGCCGCAACACACCCGTCTCGCGTAGCTCGACC
GATGCAGTCACGTCCTCGCCGGCACCGCGAAACGAGGGCTCGCCGACTATCAAGGAAGAA
TTTCACGCCGACAGAAGCGACGACGAACTGGACTTTGCCGATAAGTCAATAAAATCAGCC
ACCTGTCACTCACCGTCGAGCTGTTCTTCTGATTCCATGTCATCCGGATCGCCACCGACT
CCGACCAAATTCCCGCCGAACAGTCATTCCATAGCGCTCGCGACATCGAATGAACTGCAG
TTACATTAAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[130-166] 5.62E-9 - T[156-208] 2.16E-16 |
| SMART |
Znf_C2H2_type (IPR013087) - T[134-156] 0.0015 - T[162-184] 0.19 - T[190-211] 0.21 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[134-161] 15.583 - T[162-189] 16.165 - T[190-218] 11.24 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[136-156] . - T[164-184] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZEB2_HUMAN | 48.404 % | 167 | 1.6E-45 |
| ZEB1_HUMAN | 82.759 % | 169 | 3.57E-46 |
| ZN232_HUMAN | 50 % | 97.8 | 2.17E-22 |