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TRANSCRIPT CARD

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  1. Region 'REG00000478' > 
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g59548.01.t

Possible name(s)

SMYD2; TDRD1; ZMYND19

Gene model

Boschl.CG.Botznik2013.chrUn.g59548

Location

chrUn [351,146,589 / 351,149,785]

Sequences

Amino acid sequence

Length: 189

>Boschl.CG.Botznik2013.chrUn.g59548.01.p
MIMDRDGNGTRIFAYAYESIEGRRNARKVHEIIWELNYGQLHPGHEIVHRNGITVDNRIE
NLQLCRTEFEKPREFPSLLPNPNSVYYQVIQRIPEEPVDESFFELNSLPCYRRNEGGGTD
YDRNLCFFECHYRPCSNIEKEAREFSVCGHCHQVRYCGPTCQRTDWTVHKKHCRPRKRNR
RNRSVSPER

Nucleotide sequence

Length: 570

>Boschl.CG.Botznik2013.chrUn.g59548.01.t
TGATCATGGACCGCGATGGAAACGGGACTAGAATTTTTGCGTACGCATACGAATCCATCG
AAGGCCGTCGTAATGCCAGAAAAGTTCACGAAATAATCTGGGAGTTAAATTACGGACAAC
TACATCCGGGGCATGAGATCGTTCATCGGAACGGCATCACCGTTGACAACCGAATCGAAA
ACCTGCAACTTTGCCGGACAGAGTTTGAAAAACCCCGTGAATTTCCTTCTTTACTTCCAA
AGCCGAATTCGGTGTACTATCAAGTCATCCAACGAATCCCCGAGGAGCCGGTGGACGAGA
GTTTTTTCGAATTGAATTCGTTACCGTGTTATCGCAGAAACGAGGGGGGAGGGACCGATT
ACGACCGGAATCTGTGTTTCTTTGAATGTCATTACCGGCCGTGTTCAAATATTGAAAAAG
AGGCCCGAGAGTTCAGCGTGTGCGGTCACTGTCACCAAGTCCGTTACTGTGGCCCGACGT
GCCAACGCACGGACTGGACTGTCCACAAAAAGCACTGCCGCCCGCGGAAACGCAATCGAC
GCAACAGGAGCGTTTCGCCCGAACGTTGAT

InterProScan

PANTHER
ZMYND19 (IPR032978) - T[3-183] 5.7E-47
Pfam
HNH_nuc (IPR003615) - T[27-65] 1.3E-10
Pfam
Znf_MYND (IPR002893) - T[135-173] 9.0E-7
ProSiteProfiles
Znf_MYND (IPR002893) - T[135-173] 10.436

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZMY19_HUMAN 44.737 % 169 1.73E-53