- Transcript 'KH2012:KH.C6.158.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g61017.01.t
Possible name(s)
C3; C4B
Gene model
Location
chrUn [357,838,772 / 357,846,973]
Amino acid sequence
Length: 475
>Boschl.CG.Botznik2013.chrUn.g61017.01.p
MSTLFRLRSKIILSPDNRLAFLKGAPLAKVQGTGTHAYWYQRKPLAIDIEATGYGLLALL
FEAGATGPTQEMFDLTRKIVLWLIEQRDENGGFTTTQDTVVGLHALADYMIWSSTAEPDQ
NEVDIDVTITSPEGTEYFDPPLRFLLDKSNENVTQPIPVGPNAIAKGILNVRTQGDGEGT
ISYRCVYRTLIDEEACHFELAVSLVEHENRQIGRANPDAPIKLKMVIRVSKPNGDAAGQS
IIEITLISGYQPDEESLKRLSQEEYLDGVIERYEIANQKVVLYLKEITEKPINIPFLLTR
EINVKHPDPATVSVYYYYEPSIRCTKFYALPNNIPQLRTTPCNDEKGYGGEDMCKCAEGG
CLKCRTRAEQLTKTMCIPGMKDKCKLCKGTESDCFNMTKVACESSYVYLVNLTKSVKDTT
GVFVNFEARIETLYKRGPDAAAKSNELRKFVTRTDCFHGCRDEALASGDKEGDSV
Nucleotide sequence
Length: 1,428
>Boschl.CG.Botznik2013.chrUn.g61017.01.t
TGTCTACTTTGTTCAGGTTGCGATCCAAGATCATCTTATCTCCCGACAACAGACTGGCTT
TCCTAAAAGGTGCACCTTTGGCTAAAGTTCAAGGCACGGGCACCCACGCCTACTGGTATC
AACGTAAACCACTCGCTATTGACATCGAAGCCACTGGATATGGATTGCTGGCTCTTTTGT
TCGAGGCAGGAGCGACTGGTCGCACTCAGGAGATGTTCGACCTCACCAGGAAGATTGTCT
TGTGGCTGATCGAACAAAGAGACGAGAACGGTGGTTTTACAACAACTCAAGACACGGTTG
TTGGATTGCATGCCCTTGCAGATTACATGATATGGAGCAGCACTGCGGAACCGGACCAGA
ACGAAGTCGATATCGATGTAACGATCACATCACCGGAAGGCACTGAATACTTTGATCCTC
CTCTGAGGTTCCTTCTAGACAAGTCCAATGAAAATGTGACTCAACCTATACCGGTCGGAC
CAAATGCAATTGCAAAGGGAATTTTGAACGTACGAACACAAGGTGATGGTGAAGGCACCA
TATCGTACCGGTGCGTTTACCGTACGTTAATCGACGAAGAGGCGTGTCACTTTGAACTCG
CCGTGTCTCTGGTAGAACATGAAAATAGACAGATCGGGAGAGCAAACCCGGACGCGCCTA
TCAAACTCAAGATGGTGGTCCGCGTATCGAAACCGAATGGAGATGCTGCCGGTCAATCAA
TCATTGAAATAACTCTCATCTCCGGCTACCAGCCTGATGAAGAATCACTGAAAAGGTTAA
GTCAGGAAGAATATCTGGACGGAGTCAGCGAGCGTTACGAAATCGCGAACCAAAAAGTCG
TCCTGTATTTGAAAGAGATTACCGAAAAGCCGATAAACATCCCTTTCCTGTTGACGAGAG
AAATTAACGTCAAACATCCAGACCCTGCTACAGTCTCCGTGTATTATTATTACGAACCTT
CGGTTCGTTGTACCAAATTCTATGCGTTGCCGAACAATATACCGCAACTACGCACCACGC
CTTGCAACGACGAGAAAGGATACGGCGGCGAGGACATGTGTAAATGTGCTGAAGGTGGAT
GTTTAAAATGCAGGACAAGAGCGGAACAGCTAACAAAGACAATGTGCATTCCTGGCATGA
AAGACAAATGCAAACTCTGCAAAGGAACCGAATCGGATTGTTTCAATATGACAAAGGTGG
CCTGTGAAAGGTCTTACGTCTATCTGGTAAACCTGACGAAAAGCGTGAAAGACACTACAG
GCGTTTTCGTGAATTTCGAAGCCCGTATCGAAACTCTATACAAGAGAGGACCGGACGCTG
CCGCTAAAAGCAACGAATTGAGAAAGTTTGTGACCAGAACAGATTGTTTCCACGGATGTC
GGGACGAGGCATTGGCGTCTGGCGACAAAGAGGGTGACTCGGTATGAT
| SUPERFAMILY |
Terpenoid_cyclase/PrenylTrfase (IPR008930) - T[28-112] 6.95E-16 |
| Pfam |
A2M_comp (IPR011626) - T[35-110] 4.4E-17 |
| Gene3D |
A-macroglobulin_rcpt-bd_sf (IPR036595) - T[195-337] 9.8E-30 |
| SUPERFAMILY |
A-macroglobulin_rcpt-bd_sf (IPR036595) - T[219-330] 9.94E-28 |
| SMART |
A-macroglobulin_rcpt-bd (IPR009048) - T[237-328] 2.2E-28 |
| Pfam |
A-macroglobulin_rcpt-bd (IPR009048) - T[238-328] 6.1E-22 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[356-456] 8.63E-5 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[384-475] 8.659 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[401-467] 1.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CO3_HUMAN | 27.818 % | 104 | 1.23E-23 |
| CO4A_HUMAN | 24.946 % | 101 | 1.25E-22 |
| CO4B_HUMAN | 24.946 % | 102 | 7.23E-23 |