Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g61396.01.t

Possible name(s)

F5; F8; MFGE8

Gene model

Boschl.CG.Botznik2013.chrUn.g61396

Location

chrUn [359,176,548 / 359,181,127]

Sequences

Amino acid sequence

Length: 182

>Boschl.CG.Botznik2013.chrUn.g61396.01.p
MRTWNVRSYLQSVIGTFELCYMGMKSGLIPDYAVTSSTYWDVDHEPYRARLDNKVAEASR
GAWSSKLNKVGQWIEVDFGTVKDAAGVITQGRPQLHNQWVRQCIVACGVVKDDISIIRVG
GSDKIYPGNSDMETKVYNRFPTVLSCRYIRIYLLSWHNHMSMRFEFVHGKCFDRNPLLSG
GL

Nucleotide sequence

Length: 549

>Boschl.CG.Botznik2013.chrUn.g61396.01.t
TGCGTACTTGGAATGTTCGATCATGTTTACAAAGTGTAATCGGGACCTTTGAACGGTGCT
ACATGGGTATGAAGTCGGGACTAATTCCTGACTACGCAGTAACATCTTCGACATATTGGG
ATGTTGACCACGAACCTTACCGAGCTCGTTTGGACAATAAAGTTGCCGAAGCCAGCAGGG
GTGCATGGTCTTCAAAGCTTAGCAAAGTCGGCCAGTGGATAGAAGTTGACTTTGGAACGG
TGAAAGACGCGGCAGGAGTGATAACGCAAGGGCGTCCACAGCTTCACAATCAGTGGGTGC
GCCAATGCATAGTGGCGTGTGGTGTCGTAAAAGACGATATTTCAATCATTCGAGTTGGAG
GCTCCGATAAGGTCTACCCAGGAAACTCAGACATGGAGACGAAAGTCTACAATCGCTTTC
CGACGGTACTTTCCTGCCGATACATTCGAATTTATCTCCTGTCGTGGCACAATCACATGT
CTATGCGGTTTGAATTCGTTCACGGCAAGTGCTTTGACAGGAACCCGCTTTTATCTGGCG
GCCTATAGT

InterProScan

ProSiteProfiles	FA58C (IPR000421) - T[16-169] 22.046
SMART	FA58C (IPR000421) - T[19-167] 5.3E-6
Gene3D	Galactose-bd-like_sf (IPR008979) - T[20-172] 6.6E-38
SUPERFAMILY	Galactose-bd-like_sf (IPR008979) - T[22-166] 2.34E-34
Pfam	FA58C (IPR000421) - T[34-166] 8.3E-20

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MFGM_HUMAN	31.613 %	74.3	4.71E-16