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TRANSCRIPT CARD

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  1. Clone 'cien123189' > 
  2. Transcript 'Cisavi.CG.ENS81.R234...' > 
  3. EST 'AHC0AAA223YC09_RM1' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g61838.01.t

Possible name(s)

RLBP1; TTPA; TTPAL

Gene model

Boschl.CG.Botznik2013.chrUn.g61838

Location

chrUn [360,633,515 / 360,637,834]

Sequences

Amino acid sequence

Length: 280

>Boschl.CG.Botznik2013.chrUn.g61838.01.p
MSERYKCTLSAEALKKAVTELNEPEDNAVRLAAIDRLRKRFQDEAKSMKLIRSDDSFLIR
FLRVRKYDEDRAFKTLKNYHTRREESREIFDLVDNPKSIENFIRSGAVSALREGRAKDGT
FVVLARMGHGYQDSGDFVKFAAXLVLTXEKLLENEEAQVYGVTGINDVSELAISYVPFMA
TYSRTMSHIMQEAMPVRLKALHLVNESGIIDFIYSILTKFMNEKMKNRLVMHXXECKKXH
DKVXLKYLPFYLGGSGPDVNGDWWAQQLITTVGAGEDTAL

Nucleotide sequence

Length: 843

>Boschl.CG.Botznik2013.chrUn.g61838.01.t
TGTCAGAGCGTTATAAGTGCACCCTTTCTGCGGAAGCTTTGAAGAAGGCCGTTACTGAAT
TGAACGAACCCGAGGATAACGCAGTAAGGCTAGCAGCGATTGATAGATTGCGCAAACGAT
TCCAGGATGAAGCGAAAAGTATGAAATTGATCCGATCGGACGACTCGTTCCTTATCAGGT
TTCTCCGTGTCCGCAAATACGACGAGGACAGGGCTTTCAAGACTTTGAAAAATTATCATA
CTCGGAGAGAGGAATCTCGGGAGATATTCGATTTAGTTGACAATCCAAAGTCCATAGAAA
ATTTCATCCGTTCCGGCGCGGTATCAGCACTCCGCGAAGGAAGGGCGAAAGACGGAACAT
TTGTGGTGTTGGCAAGGATGGGCCATGGTTACCAGGACAGTGGTGACTTCGTGAAGTTCG
CTGCTNTACTCGTGCTCACGNTGGAAAAGTTGCTTGAAAATGAAGAAGCTCAGGTCTACG
GAGTAACGGGTATCAACGACGTTTCCGAACTTGCAATTTCTTACGTTCCGTTTATGGCCA
CTTACTCGCGGACAATGTCGCATATTATGCAGGAAGCGATGCCAGTAAGACTGAAGGCCC
TGCATTTGGTTAACGAGTCGGGCATAATCGATTTCATATACTCCATCTTGACCAAGTTTA
TGAACGAAAAGATGAAAAACCGGGTTGTGATGCACGGNACNGAATGCAAGAAATTNCACG
ACAAAGTGNANCTGAAATATTTGCCGTTTTACCTGGGCGGCTCCGGGCCCGACGTAAACG
GAGATTGGTGGGCTCAGCAGCTTATCACGACAGTCGGAGCAGGAGAGGACACGGCGCTCT
AAA

InterProScan

SUPERFAMILY
CRAL/TRIO_N_dom_sf (IPR036273) - T[3-86] 4.84E-15
Pfam
CRAL/TRIO_N_dom (IPR011074) - T[34-78] 5.8E-5
SMART
CRAL/TRIO_N_dom (IPR011074) - T[54-79] 5.3E-7
Gene3D
CRAL-TRIO_dom_sf (IPR036865) - T[87-268] 1.9E-33
SMART
CRAL-TRIO_dom (IPR001251) - T[95-257] 1.5E-7
ProSiteProfiles
CRAL-TRIO_dom (IPR001251) - T[96-260] 9.655
SUPERFAMILY
CRAL-TRIO_dom_sf (IPR036865) - T[105-264] 2.62E-27
Pfam
CRAL-TRIO_dom (IPR001251) - T[113-255] 4.0E-17
CDD
CRAL-TRIO_dom (IPR001251) - T[117-254] 1.15082E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TTPAL_HUMAN 31.136 % 135 1.12E-37
RLBP1_HUMAN 27.368 % 107 2.07E-27
TTPA_HUMAN 31.797 % 99.8 1.15E-24