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- Molecular Tool 'citb36f14-MO (Hamada's MO)' >
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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g62919.01.t
Possible name(s)
FOXB1; FOXD4; FOXE1
Gene model
Location
chrUn [365,258,786 / 365,260,298]
Amino acid sequence
Length: 503
>Boschl.CG.Botznik2013.chrUn.g62919.01.p
MQGQNSRNGGYNVNPGDNTRYIPWQDSRQQLSTSSPAARSHHSALSPSRSNYATDPMSQS
SDRIPRVDNHTGSESESIANDLSSEKQPYDDEDIDHDDEANDYDSLSHQSPTTSSTTCTR
DNASDEPSGKDDCGKSNSAQDNLVTTTSSGRRRKRPIQRGKPPYSYIALITMAIASAPER
KLTLGHIYKFIMDRFPFYREQNKKWQNSIRHNLTLNDCFIKLPREPGKPGKGNYWTLDPA
AEDMFDNGSFLRRRKRFKRTDTEKAMLNSYLQEQSAFTSSKTYVGQTHAPGPYYDTAHPA
SAYLAANSVGHPHAHLSQYPLPPNSSTINGQVFRIDNIIGPLHQGDPHSHMSPNHPSHSS
VHLSGRDPSGPLHDRGTPPQAQQYKSMYPTFGPGSLISPYGPGNPVSLPPNAGMSANYYC
PSNPAYHGNPGSFYNSNSRYELNPSKDPSAYPGFSPIQTSTTVTEYGEHLATMPSAPPPN
PENTYMRSADTTYTSFNRYISPV
Nucleotide sequence
Length: 1,512
>Boschl.CG.Botznik2013.chrUn.g62919.01.t
TGCAAGGACAGAACAGCCGCAACGGCGGCTATAACGTAAATCCGGGCGACAACACCCGAT
ACATTCCCTGGCAAGACTCAAGGCAACAGTTGAGCACGTCGTCTCCCGCTGCGCGCTCAC
ACCATTCCGCATTATCGCCGAGCAGAAGTAACTACGCAACGGATCCGATGTCACAATCGT
CCGATCGAATTCCAAGAGTAGACAACCACACCGGTTCCGAATCAGAGAGCATCGCCAACG
ATTTGTCGTCAGAGAAACAACCCTACGACGATGAAGACATAGACCACGACGATGAAGCTA
ACGATTATGACTCGCTCTCACATCAGAGCCCAACCACCTCTAGCACTACTTGCACGAGAG
ATAACGCAAGCGATGAGCCTAGCGGTAAAGACGACTGCGGCAAAAGCAACAGCGCACAGG
ACAATTTAGTAACCACCACTAGTTCTGGCAGGCGTCGAAAGAGACCGATACAACGGGGTA
AACCGCCGTACAGCTACATCGCCCTGATCACAATGGCTATCGCCAGCGCGCCAGAACGCA
AACTGACTTTAGGCCACATATACAAATTCATAATGGACAGATTCCCTTTTTATCGCGAGC
AAAACAAGAAGTGGCAAAACTCCATCAGGCACAACCTCACCCTCAACGATTGCTTCATCA
AGTTACCGCGCGAGCCTGGCAAGCCTGGGAAAGGAAATTATTGGACTCTAGACCCCGCCG
CAGAGGATATGTTTGATAATGGATCATTTTTGCGGAGGAGAAAGCGGTTCAAGAGAACCG
ACACCGAGAAGGCGATGTTAAACTCCTACTTACAAGAGCAAAGCGCCTTCACCTCATCCA
AAACATACGTTGGCCAGACGCACGCACCTGGACCCTATTACGACACAGCTCATCCAGCAT
CAGCGTATTTAGCAGCCAACTCTGTCGGCCACCCCCATGCACATTTATCGCAATACCCTT
TACCGCCGAATTCGTCAACCATCAACGGACAAGTATTCCGAATCGATAATATCATAGGCC
CGCTCCATCAGGGAGACCCGCACAGTCACATGAGCCCGAATCACCCGTCCCATTCTAGTG
TCCACCTGTCGGGTAGGGACCCGTCCGGTCCACTGCACGATCGTGGCACGCCACCCCAAG
CGCAGCAATACAAATCTATGTATCCTACCTTCGGACCGGGATCGTTGATATCTCCATACG
GTCCCGGTAACCCTGTCTCCTTACCCCCGAATGCAGGAATGTCAGCAAATTATTACTGCC
CGTCTAACCCCGCGTATCACGGCAATCCGGGCTCGTTTTACAATAGTAATTCAAGATACG
AGTTGAATCCGTCCAAAGACCCGTCCGCATACCCTGGTTTCTCGCCCATACAGACTTCCA
CAACCGTTACTGAATACGGTGAACACCTCGCGACGATGCCATCAGCACCTCCGCCGAATC
CAGAAAATACTTACATGAGGTCGGCCGACACGACTTACACGTCATTTAATCGATACATTT
CCCCGGTATGAA
| SMART |
Fork_head_dom (IPR001766) - T[159-249] 1.2E-59 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[159-260] 9.3E-45 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[161-255] 40.488 |
| CDD |
Fork_head_dom (IPR001766) - T[161-238] 7.43193E-48 |
| PRINTS |
Fork_head_dom (IPR001766) - T[161-174] 5.2E-23 - T[182-199] 5.2E-23 - T[205-222] 5.2E-23 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[161-174] . |
| Pfam |
Fork_head_dom (IPR001766) - T[161-245] 7.5E-38 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[161-255] 1.01E-39 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[205-211] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXE1_HUMAN | 80.851 % | 177 | 1.11E-50 |
| FOXB1_HUMAN | 54.362 % | 170 | 1.11E-48 |
| FOXD4_HUMAN | 72.549 % | 172 | 2.57E-48 |