- Transcript 'KH2012:KH.C2.216.v2....' >
- Transcript 'KH2012:KH.C10.79.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C2.967.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g64473.01.t
Possible name(s)
EIF4A1; EIF4A2; EIF4A3
Gene model
Location
chrUn [372,278,618 / 372,286,132]
Amino acid sequence
Length: 591
>Boschl.CG.Botznik2013.chrUn.g64473.01.p
MPNITRPGHWTNTKRALPPPNCHPRYAYFSRCMDYMEIYTTVVKCFNMRYVNTGHLNFRS
LSYHVSTSSLSPASRGDHKACARSRKRSFTPTQSPTRELKSLNHLCDSQEDYRGGRDGYQ
GGRDREYDRGYDRRGYDQGGEKREEGGYDRREGGYGGGGSDRGGGYRDNFDGRKDEAPPQ
QTTNGEPKEAEREYDGPAGMEVEGTIETNWDEVVESFDDMNLDEDLLRGIYAYGFEKPSA
IQQRAILPCIKGHDVIAQAQSGTGKTATFAISILQKIDMKLQRPQALVLAPTRELAQQIQ
KVVMALGDYQQVNCHACIGGTSVKTSIQQMTKTVPQVVVGTPGRVLDMISRGVLETSKMS
MFVLDEADEMLSRGFKEQIYNIFRCLPGATQVILLSATMPADVLDVTKNFMREPVRILVK
KEELTLEGIKQFFVLVEKEDWKLDTLTDLYATLTITQAVIFLNTRRKVDWLTQKLRDQLF
TVSALHGDMEQKDREIVMKEFRSGSARVLITTDLLARGIDVQQVSLVINYDLPSNRENYI
HSGNSLSNSQPRSVVHPFDVHSILRHILYGYYRLISAATTTYPRTFYRLAC
Nucleotide sequence
Length: 1,776
>Boschl.CG.Botznik2013.chrUn.g64473.01.t
TGCCAAATATAACACGGCCTGGCCATTGGACGAACACGAAGCGTGCTTTGCCCCCGCCTA
ATTGTCATCCTCGCTATGCCTATTTTAGTCGTTGCATGGACTATATGGAAATTTATACAA
CAGTTGTGAAGTGCTTCAATATGCGTTACGTTAATACCGGCCATCTCAATTTTCGTAGCC
TCTCTTACCACGTGTCCACCTCGAGCTTGTCTCCCGCTTCCAGGGGCGATCACAAAGCTT
GCGCGCGAAGTCGAAAGCGAAGCTTCACGCCCACCCAGTCGCCTACAAGAGAGCTGAAAT
CATTGAACCATCTGTGCGATAGGCAAGAAGATTACCGAGGTGGCCGTGACGGCTACCAGG
GTGGTCGTGATCGGGAGTACGACCGCGGTTACGATAGACGAGGCTACGATCAAGGTGGTG
AAAAGAGAGAAGAGGGGGGTTATGATCGCCGTGAAGGTGGATATGGCGGCGGTGGCTCGG
ACAGAGGTGGCGGGTACAGAGATAACTTTGATGGAAGGAAAGATGAAGCGCCTCCACAAC
AGACTACCAATGGTGAGCCAAAAGAAGCCGAGAGGGAATACGATGGTCCAGCTGGCATGG
AAGTCGAGGGTACTATCGAGGCAAACTGGGACGAAGTCGTCGAATCGTTCGATGACATGA
ATCTCGATGAAGACTTGCTTCGCGGCATCTACGCTTACGGTTTTGAGAAGCCGTCCGCCA
TTCAGCAGCGTGCAATCCTACCTTGCATTAAAGGACACGATGTAATCGCCCAGGCACAGT
CTGGAACTGGTAAGACGGCCACGTTTGCCATTTCGATTCTTCAGAAGATCGATATGAAGC
TGCAAAGACCCCAAGCGCTGGTCCTTGCTCCGACCCGTGAGCTTGCGCAGCAGGTTCAGA
AGGTCGTCATGGCTCTCGGCGACTATCAGCAAGTGAACTGCCACGCGTGTATTGGCGGCA
CTAGCGTGAAAACGTCTATTCAACAGATGACTAAGACGGTTCCGCAAGTGGTTGTCGGAA
CGCCCGGACGTGTGCTGGACATGATCAGCCGTGGCGTACTCGGAACGAGCAAGATGAGCA
TGTTCGTGCTTGACGAAGCCGACGAGATGCTTTCCAGGGGATTCAAAGAGCAAATCTACA
ACATCTTCAGGTGTCTGCCCGGTGCCACGCAGGTCATTCTGCTGTCCGCCACGATGCCCG
CCGACGTGTTGGACGTCACGAAAAATTTCATGAGGGAACCGGTCAGGATCTTAGTCAAGA
AAGAGGAGCTGACCCTCGAGGGTATCAAGCAGTTTTTTGTGCTTGTCGAGAAAGAGGATT
GGAAGCTGGACACGCTCACCGACTTGTACGCAACGCTCACCATTACTCAAGCTGTCATTT
TCCTAAACACAAGACGAAAAGTAGACTGGCTCACGCAGAAGCTCCGTGATCAGCTTTTCA
CCGTCTCTGCGCTGGACGGCGACATGGAACAGAAGGACCGGGAAATTGTCATGAAGGAAT
TCAGGTCGGGCAGCGCTCGCGTGTTGATCACCACTGATCTCTTGGCGCGCGGTATCGACG
TCCAGCAAGTGTCTCTCGTTATCAATTACGATTTGCCGTCGAACCGCGAAAACTACATCC
ACAGGGGCAATTCCTTGAGCAACAGTCAGCCTCGTTCTGTTGTTCACCCCTTCGACGTGC
ATTCGATACTACGACATATTCTTTACGGCTACTACCGACTTATCTCTGCTGCGACTACGA
CTTATCCGAGAACCTTCTACAGGCTTGCTTGCTGAC
| PANTHER |
EIF4A (IPR037583) - T[197-542] 1.9E-165 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[207-420] 1.36E-63 - T[357-541] 2.72E-41 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[215-243] 11.105 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[234-432] 1.1E-58 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[240-404] 7.8E-44 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[246-417] 30.063 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[363-371] . |
| CDD |
Helicase_C (IPR001650) - T[429-541] 4.25894E-35 |
| Pfam |
Helicase_C (IPR001650) - T[443-542] 7.3E-24 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[445-590] 18.242 |
| SMART |
Helicase_C (IPR001650) - T[469-543] 1.0E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 68.182 % | 465 | 7.46E-161 |
| IF4A1_HUMAN | 75.793 % | 560 | 0 |
| IF4A2_HUMAN | 72.905 % | 554 | 0 |