- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.L170.28.v3...' >
- Transcript 'Boleac.CG.SB_v3.S523...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g64728.01.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
chrUn [373,496,301 / 373,500,607]
Amino acid sequence
Length: 430
>Boschl.CG.Botznik2013.chrUn.g64728.01.p
MSESTARVIEPKEMGVAFKDVAGCEEAKIEIMEFVNFLKNPGAYEQLGAKIPKGAILSGP
PGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGASRVRDMFEQAREHAPCILFIDEI
DAIGRKRSSGKFGGNQEADQTLNQLLVEMDGFNSVGANVIVLAGTNRADVLDSALLRPGR
FDRNIYVGLPDIKGRASVFKVHLKPIKTDLDKDNMARKMAARTAGFSGADIANMCNEAAL
IAARDGAKQVEEKHFGSAIERVIGGIEKKTRILQPEEKKTVAYHEAGHAVVGWFLKHADP
LLKVSIVPRGKGLGYAMYQPKEQYLMSQEQMLDRMCMMLGGRCSEKIFFDEVTSGAQDDL
QKVTRLAYGQVTRFGMSEKVGQVSFDMDGQSQFQKPYSEHTAQIIDDEVCRVVKYLRSVF
PVTTNILCTL
Nucleotide sequence
Length: 1,293
>Boschl.CG.Botznik2013.chrUn.g64728.01.t
TGTCGGAGTCGACGGCGCGTGTCATCGAACCCAAGGAAATGGGCGTCGCGTTTAAAGACG
TCGCTGGCTGCGAAGAAGCCAAGATCGAGATCATGGAGTTTGTCAACTTCCTGAAGAATC
CCGGAGCCTACGAGCAGCTGGGCGCCAAAATACCTAAGGGCGCGATATTGTCAGGACCGC
CCGGTACTGGTAAGACTTTACTAGCCAAGGCGACCGCGGGCGAGGCCAACGTTCCCTTCA
TCACCGTGAATGGCTCCGAGTTTTTGGAGATGTTTGTCGGCGTCGGCGCCTCACGGGTGC
GGGACATGTTCGAGCAGGCCCGGGAGCACGCACCCTGCATACTCTTCATTGATGAGATCG
ACGCCATTGGACGGAAAAGGTCGTCCGGGAAGTTTGGCGGCAACCAGGAGGCGGACCAGA
CTCTGAACCAACTCCTTGTTGAGATGGACGGATTTAACAGCGTCGGGGCCAACGTCATCG
TGCTGGCCGGCACAAACAGAGCAGACGTACTGGACTCCGCACTGCTTAGGCCCGGGCGGT
TCGACCGGAATATCTACGTCGGGCTTCCCGACATCAAGGGACGGGCGTCCGTGTTCAAAG
TGCACTTGAAACCGATCAAAACAGATTTGGACAAGGACAATATGGCGAGGAAAATGGCCG
CGCGAACGGCGGGCTTTTCAGGTGCCGACATAGCCAACATGTGCAATGAGGCTGCTCTCA
TAGCAGCGAGAGACGGTGCCAAACAGGTCGAAGAAAAGCATTTCGGCTCCGCTATTGAAA
GGGTAATCGGAGGTATCGAGAAGAAAACCAGGATCTTGCAGCCAGAAGAAAAAAAGACGG
TCGCGTATCACGAAGCGGGCCACGCCGTCGTGGGCTGGTTTTTAAAACACGCCGATCCTT
TACTCAAGGTGTCCATCGTGCCGCGTGGAAAAGGCCTCGGGTACGCCATGTACCAGCCGA
AAGAACAGTATCTCATGTCGCAGGAACAGGTGCTGGATCGCATGTGTATGATGCTGGGAG
GTCGGTGCTCGGAAAAGATATTTTTTGACGAGGTCACTTCCGGCGCTCAAGACGACCTGC
AGAAAGTGACCCGACTCGCTTACGGCCAGGTTACTAGGTTTGGGATGAGCGAAAAAGTGG
GGCAAGTTTCGTTTGACATGGACGGGCAATCGCAGTTTCAAAAGCCGTACAGCGAACATA
CGGCGCAAATTATTGATGATGAGGTATGTCGTGTTGTGAAGTATTTACGCAGTGTGTTCC
CCGTGACAACGAATATACTCTGTACTCTGTAGG
| TIGRFAM |
FtsH (IPR005936) - T[2-414] 3.6E-186 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[14-262] 6.27E-65 |
| SMART |
AAA+_ATPase (IPR003593) - T[51-191] 5.0E-22 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[56-188] 1.3E-43 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[159-177] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[252-414] 2.9E-63 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[272-416] 7.19E-53 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 53.713 % | 444 | 6.56E-150 |
| AFG32_HUMAN | 70.862 % | 629 | 0 |
| YMEL1_HUMAN | 43.091 % | 337 | 1.85E-108 |