- Clone 'cien42825' >
- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g67133.01.t
Possible name(s)
DMWD; SNRNP40; WDR20
Gene model
Location
chrUn [384,374,854 / 384,377,132]
Amino acid sequence
Length: 395
>Boschl.CG.Botznik2013.chrUn.g67133.01.p
MISVIVLVSVATIGMVLQNSISVDFYSEYSLQDGYMRLIDYVTLEHKGAMKSYFGGLLCC
CWSPDGRYIVTGGEDDLVTVWSFYGRFVVARGYGHRSWISHVAFDPFLCLVPEEDEVLRW
YGSDSPALTRNSIRGRSLNRNYFKYETAADFKSTETTSVNAKSPVAKLQNLSRRNRTDST
VSKTSKISVAESIDARPRVSYRFGSAGQDAQLCLWELTDDVLFPRRRTTSMLRSYGCAHF
VRTEASPVKIANGKRDSSYSDSGSLGLNESQTVNGKGKHATSKGSPGSGKESSHSITRGF
TFFSKSSSKDSTSITEVGIEPNLVCSVFVEQPRNLIGNPAKKVIFEQPYCGAYRAFGNFR
KIRNVGDRRKSLQKGSSQVAQAQFEHALFRYQERK
Nucleotide sequence
Length: 1,188
>Boschl.CG.Botznik2013.chrUn.g67133.01.t
TGATATCGGTTATTGTCCTTGTAAGTGTGGCGACAATCGGTATGGTCCTGCAAAATTCAA
TATCAGTCGACTTCTACTCTGAATATTCTTTACAGGATGGTTACATGCGGTTAATCGATT
ACGTGACGCTGGAACATAAAGGCGCCATGAAGAGTTATTTCGGCGGACTGCTGTGCTGTT
GCTGGAGTCCGGACGGGCGTTATATTGTCACTGGCGGCGAGGATGACTTGGTCACGGTGT
GGTCGTTTTACGGCCGATTTGTAGTAGCTAGAGGATATGGACATCGGTCTTGGATTAGCC
ATGTAGCTTTTGACCCGTTTTTATGCCTCGTGCCCGAGGAAGACGAGGTTTTGCGTTGGT
ACGGAAGCGATTCACCAGCTTTAACGCGTAATAGCATTAGGGGTAGGAGTTTAAATCGTA
ATTATTTTAAATACGAGACTGCCGCCGATTTTAAATCGACCGAAACTACGTCTGTTAACG
CGAAATCTCCGGTGGCGAAATTACAGAACCTATCGCGTAGAAACCGTACGGACAGCACCG
TGTCTAAAACTTCGAAGATAAGCGTGGCGGAGTCAATAGACGCCAGACCAAGGGTGTCAT
ATAGGTTCGGGTCTGCGGGACAGGACGCGCAGTTGTGCTTGTGGGAGTTGACTGACGATG
TGTTGTTTCCGAGACGCAGAACGACGTCGATGTTGCGCAGCTATGGATGCGCGCATTTTG
TTAGGACCGAGGCTTCTCCGGTTAAAATTGCGAACGGTAAAAGAGACAGTTCTTATTCGG
ACTCGGGCAGTTTGGGGTTGAACGAGTCTCAGACTGTGAACGGGAAAGGGAAGCACGCGA
CATCAAAGGGGTCTCCGGGCAGCGGGAAGGAATCGAGTCATTCGATAACGAGAGGATTCA
CGTTTTTTTCAAAGAGTTCGTCCAAGGACAGCACCAGTATAACGGAAGGTGGAATCGAGC
CTAATTTGGTGTGCAGCGTTTTTGTTGAGCAACCTCGCAACTTGATCGGGAATCCGGCAA
AAAAAGTTATCTTTGAACAACCGTACTGTGGAGCTTATCGTGCGTTTGGCAATTTCAGGA
AAATTCGCAACGTTGGCGATCGGCGAAAGTCCCTCCAAAAAGGATCAAGCCAAGTCGCAC
AAGCGCAATTTGAGCATGCCCTATTTCGGTACCAAGAACGGAAGTAAA
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[32-107] 1.24E-14 - T[200-217] 1.24E-14 |
| SMART |
WD40_repeat (IPR001680) - T[43-82] 4.6E-5 - T[180-216] 370.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[50-130] 10.654 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[50-82] 10.408 |
| Pfam |
WD40_repeat (IPR001680) - T[57-82] 2.7E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR20_HUMAN | 46.97 % | 170 | 1.29E-47 |
| DMWD_HUMAN | 67.105 % | 120 | 9.01E-30 |