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TRANSCRIPT CARD

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  1. EST 'FK176593.1'
  2. Transcript 'Boschl.CG.Botznik201...'
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g68201.01.t

Possible name(s)

RPL4

Location

chrUn [389,060,695 / 389,064,514]

Sequences

Amino acid sequence

Length: 361

>Boschl.CG.Botznik2013.chrUn.g68201.01.p
MACARPLVTIYSEKGVASGTTHTLPAVFKAPIRPDIVNFVHTNVGKNHRQPYAVKKIAGE
QTSAESWGTGRAVARIPRVRGGGTHRSGQAAFGNMCRGGRMYAPTKTWRRWHRRCNINQR
RFAMCSALAASALPALVMSKGHKIEQTPEFPLVVEDKVQQFKKTKEAVALLRNLKAWEDI
KKVKDSKRIRAGKGKMRNRRRTMRRGPCVIYDKDEGISRAFRNIPGITLISVDRLDLLKI
APGGHVGRFLIWTESAFKRLDSLYGTWRKPSAEKKNYNLPMPKMTCTDLSKILQCDSIRS
ALRDPKRENKRRTVKKNPLKNFRAMLKLNPAAASFKRAAILFEQKRRSEKVKLRTQKAAK
K

Nucleotide sequence

Length: 1,086

>Boschl.CG.Botznik2013.chrUn.g68201.01.t
TGGCATGCGCCAGGCCCCTGGTTACTATATACAGCGAAAAAGGTGTCGCTTCTGGCACGA
CACACACATTACCGGCCGTTTTCAAGGCTCCAATCAGGCCAGACATTGTAAACTTTGTCC
ACACCAATGTCGGCAAAAATCATCGTCAACCGTACGCGGTGAAAAAGATCGCGGGTGAAC
AAACCAGTGCAGAATCATGGGGAACGGGACGTGCTGTTGCTCGTATCCCGCGTGTCAGGG
GTGGTGGTACCCACCGCTCCGGACAAGCCGCCTTCGGTAACATGTGCCGCGGTGGCCGAA
TGTACGCGCCCACCAAGACATGGCGCAGATGGCACCGTCGTTGCAACATCAACCAACGTC
GTTTCGCGATGTGCTCCGCCCTTGCCGCTTCGGCCCTTCCTGCTTTGGTCATGTCCAAGG
GTCACAAGATCGAGCAGACGCCCGAATTTCCGCTCGTGGTCGAGGATAAGGTGCAACAGT
TCAAGAAAACCAAAGAGGCTGTCGCGCTGTTGAGAAATCTGAAAGCTTGGGAGGATATCA
AGAAGGTTAAGGATTCGAAACGTATCCGTGCTGGAAAGGGAAAAATGCGCAACAGGCGTA
GAACCATGCGCCGTGGGCCTTGTGTGATTTACGACAAAGATGAAGGTATCTCGAGAGCTT
TCCGTAACATTCCAGGCATCACCTTGATCAGCGTGGATCGTTTGGATCTTTTGAAAATTG
CTCCCGGCGGCCACGTTGGTAGATTCCTGATCTGGACGGAAAGTGCTTTCAAACGTTTGG
ATTCATTGTACGGAACATGGCGTAAACCGTCGGCCGAGAAGAAAAACTACAACCTTCCCA
TGCCCAAGATGACATGTACCGATTTGAGTAAGATTCTGCAATGCGATTCGATCCGGTCCG
CGCTTCGCGATCCCAAGAGGGAGAACAAGAGACGTACCGTGAAGAAGAATCCTCTGAAGA
ACTTCAGGGCAATGCTGAAGCTCAACCCGGCGGCGGCTAGTTTCAAGCGGGCGGCTATCT
TGTTTGAACAGAAGAGACGGAGCGAGAAGGTGAAGCTGCGTACTCAGAAGGCCGCTAAGA
AATGAT

InterProScan

Gene3D
Ribosomal_L4_dom_sf (IPR023574) - T[2-304] 3.4E-138
SUPERFAMILY
Ribosomal_L4_dom_sf (IPR023574) - T[7-262] 1.2E-81
Pfam
Ribosomal_L4/L1e (IPR002136) - T[24-261] 2.1E-38
Pfam
Ribos_L4_C_dom (IPR025755) - T[275-347] 1.8E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL4_HUMAN 71.989 % 504 1.82E-179