Aniseed - Transcript Card

Clone 'cicl016j04' >
Transcript 'Harore.CG.MTP2014.S1...' >
Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g68384.01.t

Possible name(s)

TPI1

Gene model

Boschl.CG.Botznik2013.chrUn.g68384

Location

chrUn [389,981,156 / 389,982,193]

Sequences

Amino acid sequence

Length: 234

>Boschl.CG.Botznik2013.chrUn.g68384.01.p
MNGDKKMLDVIIENLNKANCANTDVVVAPPTAYLSYVRGKLDGKVSVAAQNSYKVAKGAF
TGETSPDMLVDLGINWAILGHSERRHVFGESDALIGEKIKYALERGLYVIPCIGEKLDQR
EAGTTLQVVSEQMASIKSNVNDWSKVVIAYEPVWAIGTGKVATPEQAQEVHLQLRKWLAD
NVSDAVSKSTRIIYGGSVSAGNCKELAKQPDVDGFLVGGASLKPEFSDIINARS

Nucleotide sequence

Length: 705

>Boschl.CG.Botznik2013.chrUn.g68384.01.t
TGAATGGTGATAAGAAGATGCTCGATGTCATTATAGAAAATTTGAATAAAGCTAACTGTG
CCAACACCGACGTTGTGGTAGCCCCACCAACAGCGTACCTGAGCTATGTCAGAGGTAAAC
TGGACGGGAAAGTCAGCGTCGCAGCTCAAAATTCATACAAGGTTGCAAAAGGAGCGTTCA
CTGGAGAAACAAGTCCTGACATGCTGGTGGATTTAGGAATAAATTGGGCAATTTTGGGCC
ATTCTGAACGTCGCCATGTTTTTGGAGAAAGTGACGCCCTAATTGGAGAAAAAATCAAAT
ACGCCTTGGAGCGTGGGTTGTATGTGATTCCATGCATTGGGGAGAAGCTGGACCAGCGAG
AAGCTGGCACAACGTTGCAAGTGGTCTCGGAGCAAATGGCATCAATAAAAAGTAACGTTA
ATGACTGGAGCAAGGTCGTTATCGCATACGAGCCAGTTTGGGCGATCGGAACAGGCAAAG
TCGCCACGCCTGAACAAGCACAAGAAGTCCACCTGCAACTGCGTAAATGGCTCGCTGATA
ACGTTTCAGATGCAGTCTCCAAGTCCACTCGTATTATTTATGGCGGTTCCGTTTCGGCTG
GTAATTGCAAAGAGCTTGCCAAGCAGCCTGATGTCGATGGCTTTTTGGTTGGGGGAGCGT
CCCTCAAGCCCGAGTTTTCTGACATCATTAACGCACGCAGTTAAC

InterProScan

PANTHER	Triosephosphate_isomerase (IPR000652) - T[1-233] 1.4E-112
Hamap	TrioseP_Isoase_bac/euk (IPR022896) - T[1-232] 52.708
Gene3D	Aldolase_TIM (IPR013785) - T[1-234] 3.2E-95
ProSiteProfiles	Triosephosphate_isomerase (IPR000652) - T[1-232] 73.888
CDD	Triosephosphate_isomerase (IPR000652) - T[1-231] 1.12993E-117
Pfam	Triosephosphate_isomerase (IPR000652) - T[1-230] 7.5E-82
TIGRFAM	Triosephosphate_isomerase (IPR000652) - T[2-225] 8.7E-71
SUPERFAMILY	TIM_sf (IPR035990) - T[15-232] 3.4E-86
ProSitePatterns	Triosephosphate_isomerase_AS (IPR020861) - T[149-159] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TPIS_HUMAN	69.231 %	330	2.94E-115