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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.693.v1....'
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g70086.01.t

Possible name(s)

AVPR1A; GNRHR; SSTR1

Location

chrUn [397,752,226 / 397,755,621]

Sequences

Amino acid sequence

Length: 233

>Boschl.CG.Botznik2013.chrUn.g70086.01.p
MAAAGWLSSVICAIPATVFFSTCEVVTCENITLRQCVDNIAVSQKLLQPYRVFTMIVSFL
LPLGVTIASYTVISYQIKKMIRKDVELTGKSDQGGWKALSKAKRRTWTIEFVTTMTFLIC
WGPYYVIGFMHWFLPDDAYTETLLWTGRIAYLMMYLNCILHPIVFGVFMKKVREAFLVCL
RYPIKLASKTTETPPQSNSQPRSPSLEMELINRNNNKLTNDHTKLLQMSEGVC

Nucleotide sequence

Length: 702

>Boschl.CG.Botznik2013.chrUn.g70086.01.t
AATGGCAGCCGCTGGGTGGCTTTCGAGTGTTATTTGTGCAATACCCGCGACTGTCTTTTT
CTCCACCTGCGAAGTCGTGACCTGCGAAAATATCACTCTGAGGCAGTGCGTGGACAATAT
TGCGGTGTCCCAAAAGCTCCTGCAGCCGTACCGCGTTTTCACGATGATTGTGAGCTTCTT
GCTACCATTGGGAGTCACCATTGCCTCCTACACAGTAATTAGCTACCAAATTAAGAAGAT
GATACGGAAGGATGTAGAGCTAACCGGGAAGTCCGATCAGGGCGGGTGGAAAGCGTTGAG
CAAAGCCAAAAGAAGAACGTGGACAATAGAATTCGTCACAACTATGACATTTCTCATCTG
CTGGGGACCATACTACGTAATAGGCTTCATGCATTGGTTTCTTCCGGACGACGCCTACAC
GGAAACGTTATTGTGGACCGGTCGCATCGCGTATTTAATGATGTATTTGAACTGTATTCT
GCATCCGATCGTATTTGGGGTGTTCATGAAAAAAGTGCGAGAGGCATTCCTCGTTTGTTT
GCGATACCCAATCAAGCTGGCGTCGAAGACCACGGAGAGGCCGCCTCAATCCAATTCGCA
ACCGAGAAGCCCATCCTTGGAAATGGAACTTATCAATCGCAACAACAACAAGTTAACAAA
CGACCATACCAAGTTACTGCAGATGTCCGAAGGCGTATGCTG

InterProScan

ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[1-165] 19.95
Pfam
GPCR_Rhodpsn (IPR000276) - T[3-164] 2.9E-15
PRINTS
GPCR_Rhodpsn (IPR000276) - T[51-74] 1.6E-9 - T[106-130] 1.6E-9 - T[147-173] 1.6E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value