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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  2. Transcript 'Cisavi.CG.ENS81.R1.1...' > 
  3. Transcript 'Haaura.CG.MTP2014.S3...' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g70619.01.t

Possible name(s)

FER1L6; MYOF; OTOF

Gene model

Boschl.CG.Botznik2013.chrUn.g70619

Location

chrUn [400,102,181 / 400,105,796]

Sequences

Amino acid sequence

Length: 236

>Boschl.CG.Botznik2013.chrUn.g70619.01.p
WLVGEDKQETDIHYRSLTGEGNFNWRFIYPFEYLVAEEKIVVTKKESIFSWDETEFKIPP
RLNLQVWDADHFSADDFLGSLTLDLTHLPRGAKSAAKCSLNMATEEDERAGKGVPMVSLF
KQKKIKGWWPFTAKNEQDELEITGKVEAEIILMTSDEAEKNPAGYGRDEPDPLEKPKRPD
TSFLWFLNPWKSFRYLICARFKWLIIKLVIGILLIALLVLFIYASPQWFSKKIIGA

Nucleotide sequence

Length: 712

>Boschl.CG.Botznik2013.chrUn.g70619.01.t
GATGGTTGGTCGGCGAAGACAAACAAGAGACTGACATTCATTATCGATCTCTTACCGGCG
AAGGCAACTTCAATTGGCGGTTCATATATCCGTTCGAATATCTCGTTGCCGAAGAAAAGA
TTGTTGTAACAAAAAAGGAATCGATCTTCTCGTGGGATGAAACGGAATTCAAGATCCCAC
CGCGATTGAATCTGCAAGTTTGGGATGCCGACCATTTTTCCGCAGACGACTTCCTGGGTT
CTCTGACACTCGATCTCACGCATCTACCGCGAGGGGCCAAGTCCGCGGCCAAATGTAGCC
TGAACATGGCCACCGAAGAAGATGAGCGAGCTGGCAAAGGCGTCCCGATGGTATCGTTGT
TCAAGCAGAAAAAAATCAAAGGCTGGTGGCCATTTACAGCAAAGAATGAGCAAGACGAAT
TGGAAATTACGGGAAAAGTTGAAGCTGAAATCATTTTGATGACGTCAGATGAAGCGGAGA
AAAACCCTGCAGGATATGGGCGTGATGAGCCAGACCCGCTTGAAAAGCCAAGGCGCCCTG
ACACCTCGTTTCTGTGGTTTCTCAATCCTTGGAAGTCGTTTCGATATTTGATTTGCGCTC
GATTCAAATGGCTCATCATAAAACTCGTTATCGGAATCTTGCTGATCGCACTTCTGGTTT
TGTTCATCTACGCTTCCCCCCAGTGGTTCTCGAAGAAAATCATCGGAGCTTA

InterProScan

Gene3D
C2_domain_sf (IPR035892) - T[1-120] 1.8E-13
CDD
C2F_Ferlin (IPR037725) - T[1-100] 5.46687E-60
PANTHER
Otoferlin (IPR029996) - T[4-235] 2.9E-117
PANTHER
Ferlin (IPR037721) - T[4-235] 2.9E-117
Pfam
Ferlin_C (IPR032362) - T[142-233] 8.0E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OTOF_HUMAN 64.286 % 310 2.71E-97
FR1L6_HUMAN 52.72 % 225 9.94E-68
MYOF_HUMAN 47.699 % 215 4.26E-64