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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  2. Clone 'cicl059i05' > 
  3. Transcript 'KH2012:KH.L122.12.v1...' > 
  4. Clone 'cicl001g08' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g71792.01.t

Possible name(s)

CSMD3; SRPX; SRPX2

Gene model

Boschl.CG.Botznik2013.chrUn.g71792

Location

chrUn [405,481,682 / 405,484,610]

Sequences

Amino acid sequence

Length: 209

>Boschl.CG.Botznik2013.chrUn.g71792.01.p
KRCKDIKPKKKSNEILTCSNGRTVGSVCTFSCKKGLKLQGDAVVICQGISKWTNEKELPT
CAEANATPKPPKSCRMRNKKHDACCGAKSFNSNSAKCCKGVVSPAGKSATKCCAAKPYNP
RQKGCCKDKLFSKLANLRYDSTHRSQHSSRAVVGNLFRLKSHASPIFFHFNSQRAIPINC
YVTIEISDVIVVQIQTTYMGFVVGAIFSL

Nucleotide sequence

Length: 632

>Boschl.CG.Botznik2013.chrUn.g71792.01.t
CAAACGCTGCAAAGATATCAAACCCAAGAAGAAGAGCAACGAAATTCTCACTTGTTCAAA
TGGTAGAACCGTCGGTTCGGTTTGTACATTTTCGTGCAAGAAAGGTCTGAAATTGCAAGG
AGACGCGGTGGTGATCTGTCAAGGCATCTCCAAGTGGACGAACGAAAAGGAACTTCCGAC
CTGTGCAGGAGCAAACGCCACTCCAAAGCCGCCAAAATCGTGCAGAATGCGGAACAAAAA
ACACGACGCCTGTTGCGGTGCCAAATCCTTCAATTCAAATTCCGCGAAATGCTGCAAAGG
CGTTGTGAGGCCCGCGGGTAAGAGTGCGACAAAATGTTGCGCCGCCAAGCCCTACAATCC
ACGACAGAAAGGCTGCTGCAAGGATAAATTATTCTCGGAGCTCGCCAATCTGAGGTATGA
CAGTACTCACAGGTCACAGCACTCTTCGCGTGCAGTGGTCGGGAACCTTTTTCGTCTGAA
GAGCCATGCTAGCCCTATATTTTTCCATTTTAACTCCCAAAGAGCCATACCTATCAATTG
TTACGTCACAATTGAAATTAGTGACGTCATTGTAGTACAAATTCAAACTACCTACATGGG
ATTCGTCGTGGGCGCCATATTTTCTCTGTAAA

InterProScan

ProSiteProfiles
Sushi_SCR_CCP_dom (IPR000436) - T[1-63] 9.981
SMART
Sushi_SCR_CCP_dom (IPR000436) - T[3-61] 2.0E-7
Pfam
Sushi_SCR_CCP_dom (IPR000436) - T[8-61] 6.4E-7
CDD
Sushi_SCR_CCP_dom (IPR000436) - T[8-61] 6.7502E-7
SUPERFAMILY
Sushi/SCR/CCP_sf (IPR035976) - T[12-64] 4.17E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value