- Transcript 'Haaura.CG.MTP2014.S2...' >
- EST 'AHC0AAA224YL04_RM1' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C6.158.v2....' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S100.g02042.01.t
Possible name(s)
FNTA; NISCH; RABGGTA
Gene model
Location
S100 [42,829 / 45,650]
Amino acid sequence
Length: 443
>Haaura.CG.MTP2014.S100.g02042.01.p
MLTIPSPDWVHELSLCDQFLQFDDRNFHCWDYRRFVVKNSDPKVSLDHEIECTNQLVENN
FSNYSSWHYRSKLLPLRYPHSSTSDRIEESKLLEELELVQNAFFTDPNDQSAWFYHRWLL
GRGNTSQGLIAVHAYASPLILECVFRKPINEEEMTAAVSVTVDDIIQEGSWKSLINETGY
QHAWVFKFSAGSSLSNKNSKSINVKYAEQSHPIILESESNESIQFYISHNEFRQELSSAK
LELLESELESCRQLNELEPGNKWAILTLVLLMRAIDPTKHRTETDKLVTELMSVDTTRKQ
YYGDLHSKFAIEDCISDREWKNDEVNISGRNLSRICHLQYFSAIKHLDLSKNKLKALSGP
FHLLRNCKVILADGNEIENFPGLRHMKKLARLSLNQNCLRRVDAFKPLITCSNLIELEVT
GNSVCDQKCSLEELFPNLTIKF*
Nucleotide sequence
Length: 1,329
>Haaura.CG.MTP2014.S100.g02042.01.t
ATGCTGACAATTCCGAGCCCAGATTGGGTACATGAGCTTTCTCTTTGTGACCAATTTCTT
CAATTTGATGATCGAAATTTTCACTGTTGGGATTACAGAAGATTCGTAGTGAAAAATTCA
GACCCAAAGGTGTCTTTGGACCATGAGATCGAATGCACTAATCAACTTGTTGAAAATAAT
TTTTCAAATTATTCTTCGTGGCATTACAGAAGTAAATTACTTCCCTTACGGTACCCTCAC
TCATCTACAAGTGATCGTATTGAAGAAAGCAAACTGCTAGAAGAGCTTGAACTCGTACAG
AATGCTTTCTTCACTGATCCGAATGACCAGAGTGCATGGTTCTATCACAGATGGCTACTT
GGCAGAGGTAACACTTCCCAGGGATTAATCGCAGTTCATGCCTATGCATCACCACTTATA
CTAGAATGCGTATTTCGAAAACCAATTAACGAGGAAGAGATGACAGCAGCCGTATCAGTG
ACAGTCGATGACATTATCCAGGAGGGCTCTTGGAAAAGTCTTATCAATGAAACTGGTTAC
CAGCATGCATGGGTGTTTAAGTTCTCCGCAGGATCTTCCCTATCCAATAAGAATTCCAAA
TCAATAAATGTGAAATATGCAGAACAATCTCATCCAATCATTCTGGAATCAGAGAGCAAT
GAATCAATTCAGTTTTACATTAGTCACAACGAGTTTCGTCAGGAACTGAGCAGTGCCAAG
CTGGAACTTCTCGAATCGGAACTAGAATCATGCAGACAGCTCAATGAGTTAGAACCTGGA
AACAAATGGGCAATATTAACACTTGTTTTGCTGATGCGGGCGATCGATCCGACAAAACAT
AGAACGGAAACCGACAAGCTTGTGACTGAATTAATGTCAGTGGACACGACGAGGAAGCAG
TATTATGGAGATCTCCACAGCAAGTTTGCGATAGAGGATTGCATATCAGACAGAGAATGG
AAGAACGATGAAGTTAATATATCAGGAAGAAATTTGAGTCGTATTTGTCATCTGCAATAC
TTCTCGGCGATTAAACATTTGGATTTGTCTAAGAATAAACTGAAAGCATTGTCAGGACCT
TTCCATCTTCTGAGGAATTGCAAGGTAATTCTTGCAGATGGAAACGAAATTGAGAATTTC
CCAGGATTGAGACACATGAAGAAATTGGCGCGACTGTCGTTAAACCAGAATTGCTTGAGA
AGAGTTGATGCATTCAAGCCTTTGATTACGTGTTCAAATCTCATAGAACTGGAAGTGACC
GGAAATTCAGTCTGTGATCAAAAGTGTTCTCTGGAAGAATTATTTCCTAATCTTACCATC
AAGTTTTGA
| PANTHER |
RabGGTase_alpha (IPR032955) - T[4-312] 5.2E-70 |
| ProSiteProfiles |
Prenyl_trans_a (IPR002088) - T[8-42] 15.108 - T[45-79] 13.886 - T[91-125] 14.373 - T[243-277] 5.283 |
| Pfam |
Prenyl_trans_a (IPR002088) - T[12-39] 3.4E-7 - T[53-74] 1.3E-5 - T[95-121] 4.8E-9 |
| Pfam |
RabGGT_asu_insert-domain (IPR009087) - T[141-208] 2.1E-4 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[322-439] 3.4E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PGTA_HUMAN | 39.238 % | 308 | 9.95E-100 |