- Transcript 'Boleac.CG.SB_v3.S156...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boleac.CG.SB_v3.S28....' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1063.g07508.01.t
Possible name(s)
BOC; CDON; ROBO1
Gene model
Location
S1063 [22,499 / 26,879]
Amino acid sequence
Length: 860
>Haaura.CG.MTP2014.S1063.g07508.01.p
EKLKVMPLSAVYVNLDAQNHTGTILECGTSAELSILWIWCLNGREIKDAKGNVLNLNSHG
KMSGFYQCFATAGKEVEYTTFQVDGGAEPAESIPERDTTDNYFKVELDKRGIKPPIITSP
AHTSNHDSFELSWHIDENTEIQMKLISIKYCKDPPDTQWEVVNVPSSLDMVVLHGLEPGS
TYKLEMVSVSQSDTRSMLALSSFSTGEIPKSNPPPNRIEPRPEKTPKQNYRDRTRIPMAP
SKPTVTEISAHSISLMWYPRGNGGSPIKWYRVQSRKIGSNEEWKTIADNLPIANFPPYEI
TSLPRGSSFKFRVFAVNSKGDSRASSPSSPYPSKSPVKKPIPSDPPFIMDTKIQGDTSIV
LKWRYDFPVSALIGYRVFYRSSDSDDEQDYINEEVRDPTATSYVIHHLRPEMQYDIKIQA
FNSEYRSKFSNVVIIEMPKAGEGYHPPIRPKPDEPQVYIPGDDHNEPAREKAYHRSTMFL
ISGGVIAFILIILVISVFFYWRKRNSLSVQSTPDLKLKKIDSNKYSAGKAANSPKINNST
DSVPPNNSSNGHTPNQYNQSPHDTRCTCSRHHSNHSSLGRDGGDFSQYTALPYRPDPAHR
IYGDNQELGRLNWDPGFTNIQANPLHMYMDHRYPYYPPGLGGLPIRWVRGANGEFCHIVP
VDTRKMSGTDGGTELCGGYPGSGGAMVMRTYDGNVGYYDETVHRPDHGYHSNDDMTKSKD
DANNDKSTKVSTLTSPNLPSSDGDSNSEGVATSGVLTHSDTISSRTPSSLSREEGLKIET
EDTACGSMKQSTRSTRNSQYDDMRCQEKCLEITDEMPLCSQSLSLEKLNENCDSIDENTN
FIKSSENITERQTKETIIS*
Nucleotide sequence
Length: 2,580
>Haaura.CG.MTP2014.S1063.g07508.01.t
GAAAAATTAAAAGTCATGCCATTGTCAGCTGTATATGTTAATCTTGATGCCCAAAATCAT
ACTGGAACCATACTTGAATGTGGAACTTCAGCAGAACTGTCTATTTTGTGGATCTGGTGT
CTGAATGGAAGAGAAATTAAAGATGCTAAAGGCAATGTTTTGAACTTAAATTCTCACGGA
AAAATGTCCGGATTCTATCAATGTTTTGCAACTGCCGGGAAGGAAGTCGAATATACGACA
TTTCAAGTTGATGGGGGAGCTGAACCTGCAGAGAGTATACCTGAGAGGGATACAACGGAT
AATTATTTCAAAGTAGAATTAGATAAGAGAGGCATCAAGCCACCCATCATAACTAGTCCA
GCTCACACAAGCAATCATGATTCATTTGAATTATCATGGCATATTGATGAAAACACTGAA
ATACAGATGAAGCTCATCAGCATAAAGTATTGCAAGGATCCTCCTGATACTCAGTGGGAA
GTTGTGAACGTGCCTTCGTCCCTTGACATGGTAGTTCTTCATGGATTGGAACCAGGTTCC
ACGTACAAGTTGGAAATGGTCTCAGTAAGTCAGTCTGACACTCGTAGTATGCTTGCACTT
TCAAGTTTCTCAACCGGCGAAATACCCAAGTCCAATCCACCACCTAACAGAATAGAGCCA
AGACCAGAAAAGACACCGAAACAAAATTATAGAGATCGCACAAGAATCCCTATGGCTCCA
TCGAAACCGACAGTTACTGAAATTTCAGCACATTCAATCTCGTTGATGTGGTATCCTCGA
GGAAATGGGGGCTCACCAATAAAGTGGTATCGGGTGCAAAGTCGAAAAATTGGAAGCAAC
GAAGAATGGAAAACGATCGCTGATAATTTGCCCATAGCTAACTTTCCACCCTATGAAATA
ACTAGTCTTCCAAGAGGATCATCATTCAAGTTCCGAGTTTTTGCTGTGAATTCCAAAGGA
GATTCTCGCGCTTCTTCCCCTTCCTCGCCCTATCCATCGAAATCTCCTGTGAAAAAGCCG
ATTCCATCTGATCCTCCGTTCATCATGGATACCAAAATACAGGGAGACACCAGCATAGTG
TTAAAATGGAGGTATGACTTCCCTGTTTCTGCTCTCATCGGGTACAGAGTGTTTTATCGT
TCGTCGGACAGTGACGATGAACAAGATTATATTAATGAAGAAGTTAGAGATCCAACTGCT
ACCTCTTATGTCATACATCATTTGAGGCCTGAAATGCAGTATGATATAAAGATACAGGCA
TTCAACAGTGAATATCGCTCCAAGTTTTCTAATGTCGTGATTATCGAAATGCCCAAAGCT
GGTGAAGGATATCACCCACCTATCAGACCAAAACCAGATGAGCCACAAGTTTACATCCCT
GGTGATGACCACAATGAACCCGCAAGAGAAAAAGCATACCACAGAAGCACAATGTTTCTG
ATCAGCGGTGGTGTGATTGCATTCATTTTAATCATCCTGGTTATTTCTGTGTTCTTTTAT
TGGAGAAAAAGAAACAGTCTGAGCGTGCAATCGACCCCTGACCTCAAACTGAAGAAAATA
GATTCAAACAAGTACTCAGCAGGCAAGGCCGCTAATTCTCCAAAAATAAATAATAGTACG
GACAGCGTACCACCGAATAACTCCTCAAATGGTCACACTCCAAATCAGTATAACCAATCT
CCTCATGACACGAGATGTACGTGTTCACGTCACCACAGCAATCATTCCAGTCTTGGCCGA
GACGGCGGAGATTTTTCCCAGTATACTGCTCTGCCATATAGGCCTGATCCGGCACATAGA
ATATATGGAGATAACCAAGAGCTGGGACGGCTCAATTGGGATCCTGGTTTTACGAACATA
CAAGCGAATCCTTTACACATGTATATGGATCACAGGTATCCATATTACCCGCCTGGGTTA
GGGGGCTTACCAATAAGATGGGTGAGAGGTGCTAACGGAGAATTCTGCCACATTGTTCCG
GTCGACACTCGTAAAATGAGTGGGACTGATGGGGGTACAGAACTGTGTGGGGGATACCCG
GGTAGTGGTGGTGCTATGGTCATGCGAACTTATGATGGCAACGTCGGGTATTATGATGAA
ACTGTTCACAGACCTGATCATGGTTACCATAGCAATGACGACATGACAAAATCGAAAGAC
GATGCAAATAATGATAAATCGACCAAAGTCAGTACATTGACTTCACCTAATTTACCATCC
AGCGATGGCGATAGCAACAGTGAAGGTGTAGCTACTTCAGGTGTCCTGACACACAGTGAT
ACGATTAGCAGTCGAACTCCTTCGAGCCTCTCTCGGGAAGAGGGCTTGAAAATAGAGACT
GAAGATACTGCTTGTGGCAGTATGAAACAATCAACTCGCAGTACACGTAATTCGCAGTAC
GATGATATGAGGTGTCAAGAAAAGTGTTTAGAAATAACAGACGAAATGCCTTTGTGCTCT
CAAAGTTTATCTCTTGAAAAACTAAATGAGAACTGTGACAGTATAGATGAAAATACAAAT
TTTATTAAGTCCTCTGAAAACATAACAGAACGACAAACTAAAGAAACAATCATATCATAA
| SMART |
FN3_dom (IPR003961) - T[111-196] 2.8 - T[237-322] 1.8E-8 - T[343-427] 2.3E-5 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[114-214] 13.531 - T[239-336] 21.294 - T[341-440] 17.026 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[117-196] 6.98E-6 - T[236-438] 1.4E-28 |
| Gene3D |
Ig-like_fold (IPR013783) - T[118-198] 3.4E-7 - T[228-336] 1.1E-20 - T[339-441] 1.6E-18 |
| Pfam |
FN3_dom (IPR003961) - T[123-191] 1.3E-6 - T[239-325] 1.9E-11 - T[345-430] 1.6E-10 |
| CDD |
FN3_dom (IPR003961) - T[237-321] 7.34607E-12 - T[344-435] 4.01425E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ROBO1_HUMAN | 28.169 % | 84.7 | 1.27E-16 |
| CDON_HUMAN | 31.323 % | 173 | 2.49E-44 |
| BOC_HUMAN | 32.524 % | 162 | 7.5E-41 |