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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S106.g02130.02.t

Possible name(s)

SPSB1; SPSB2; SPSB4

Gene model

Haaura.CG.MTP2014.S106.g02130

Location

S106 [49,169 / 50,347]

Sequences

Amino acid sequence

Length: 337

>Haaura.CG.MTP2014.S106.g02130.02.p
MGQKISSSDGRSGIRQLAFIEPIISRTASRHSSHSSNSSSNNSSTTRSGRRSDVTSPPKH
GRRHSHRDHHRSHHRHHNGNHLSASGLEPECPHRLDVLLDMPAAGITDQRKHGWNPEDKS
VNVFIKDDDHVMHRHPVAQSTDGVRGKVGFSRGLHCWEITWNTRQRGTHAVVGVATVEAP
LTCVGYRSLIGQNEHSWGWDLGRNKLYHGGKHHREDKASGCKVYPTYLDSDVNFVVPEKI
LVVLDMDEGTMSYVADGQYLGVAFSGLKGKTLYPVISCVWGHCEVGIKYINSLEPAPLPL
AELCRRRVRMSLGKPNLHHVQKLPLPNSLKDYVLYR*

Nucleotide sequence

Length: 1,011

>Haaura.CG.MTP2014.S106.g02130.02.t
ATGGGACAGAAAATTTCATCGAGCGATGGTAGATCTGGCATAAGGCAATTGGCGTTCATA
GAGCCAATTATTTCCCGTACTGCATCGAGACATTCATCGCATTCTTCTAATAGCTCGAGT
AACAATAGTTCAACGACGAGATCAGGTCGACGTAGCGATGTAACTTCACCACCTAAACAT
GGCCGTCGACATAGTCATCGAGATCATCACAGAAGTCATCATAGACACCATAATGGAAAT
CATTTATCTGCTTCTGGTTTGGAACCGGAATGTCCACACAGGCTTGATGTTCTCCTTGAC
ATGCCAGCAGCTGGTATAACAGACCAACGCAAGCATGGTTGGAACCCAGAAGACAAGAGC
GTTAATGTTTTCATCAAAGACGACGACCATGTAATGCACAGACATCCGGTAGCTCAATCC
ACAGACGGTGTCAGGGGCAAAGTAGGATTTTCCCGTGGACTTCACTGTTGGGAAATCACA
TGGAACACGAGGCAACGTGGTACTCACGCGGTGGTAGGTGTTGCCACAGTTGAAGCCCCA
TTGACTTGTGTTGGTTACCGGTCACTTATCGGCCAGAACGAGCATTCGTGGGGCTGGGAC
CTTGGTCGCAACAAACTGTATCATGGTGGAAAACATCACCGCGAAGATAAAGCCAGTGGT
TGCAAAGTCTATCCTACCTACTTGGACTCTGATGTTAATTTTGTTGTTCCGGAGAAAATA
TTGGTTGTTTTGGATATGGATGAAGGTACTATGAGCTATGTTGCCGATGGACAGTATTTG
GGCGTCGCGTTTTCTGGCCTTAAAGGAAAAACGTTGTACCCGGTCATAAGTTGTGTATGG
GGTCACTGTGAAGTCGGGATTAAATACATCAACAGTCTTGAACCTGCCCCATTGCCACTT
GCTGAGCTATGCAGAAGAAGAGTAAGAATGTCACTGGGAAAACCAAACCTCCATCACGTG
CAAAAATTACCTTTGCCAAACTCTCTCAAAGACTACGTTTTATATCGATGA

InterProScan

SUPERFAMILY
ConA-like_dom_sf (IPR013320) - T[91-309] 1.15E-57
ProSiteProfiles
B30.2/SPRY (IPR001870) - T[92-294] 13.205
SMART
SPRY_dom (IPR003877) - T[152-293] 3.8E-21
Pfam
SPRY_dom (IPR003877) - T[155-283] 3.1E-18
SMART
SOCS_box (IPR001496) - T[297-336] 3.1E-12
ProSiteProfiles
SOCS_box (IPR001496) - T[297-336] 13.376
Pfam
SOCS_box (IPR001496) - T[297-335] 2.2E-10
SUPERFAMILY
SOCS_box-like_dom_sf (IPR036036) - T[298-335] 8.11E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPSB4_HUMAN 62.302 % 338 7.61E-117
SPSB1_HUMAN 59.289 % 326 3.84E-112
SPSB2_HUMAN 51.22 % 253 1.8E-83