- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1110.g07625.01.t
Possible name(s)
FOXJ1; FOXR1
Gene model
Location
S1110 [13,108 / 20,634]
Amino acid sequence
Length: 981
>Haaura.CG.MTP2014.S1110.g07625.01.p
MILRVETSSSPILAKASNFNRVSALDKWKTDWFHEISNLFTVTTDQVIGCNETCLTTHCH
TSERNKYHCRMLQNRAKLNMVVSMVERYVKGTLSVETTERDSKVQTDDMKRNMCDGTKIT
PWTMVNPDEVCPRNNGDETRINKYAKKKFTAEEIVDDLSIGTDLFSLNDFDGTCETDISN
ALSGPCDIPDDILAQACEVINKTQHTPTTLECKDEKTDSPIGFSTTPEITNIQELNSTEH
TQTEKILLDSGYTESVITPVVKVNGESLSENHETTNKLQTQVHSANISVPKKIIQRCTTQ
PTVTARGQVYLLSPSSRHSSDSKTPIPQLSLISNVKKEIKPAQTSNVVDIVPATLPDGRV
VHLEVTRKMPSTRPAVLPAIGLKHIFIPKNSINNVHQNPRKISRIIRTSKDQAFSQLNAR
ISLSTNSQNRTKQIRAESPNGAVQTICLKKVTSLAPPRISAGNLAGRVVHLTTVTPELYR
RLQKSNGKITIQKAVFNQGKGASSTTTGIANTLPKNIRKRTHEGEIKAEIDCNIIETNDN
VNQNVNTTIQANKNKDSDLNTDILEELMNDLSSPQASEVNSVGSNEEAFFDQLNIDDLMS
NVTPSSHKNADDLSAKNTVLVVESDHAYNVAAADNTTLTGNETIPPYINGTSRLVKNLMY
SQERLPKHCSTMLSSHGVDTKRKILCPINGNTRYASDNSIMRIKSEVSDFKIKRKYTKRN
EAKTSKADEKTTTSLGPTATAAAKNPYIKPPLPYNILIYLAFRDVGFESLTVKQIYRFIL
DTFPYFRHAHPTWQNAIRHQLCCCKVYEKVPLIEGEMRNDKPSGKSAWKVLDEDGERKLE
EDAAVSLQKKDVIGKIKEALCDPSIFSELFDDVLTAYAERKRRISVRAREKQSILQSSGE
YDTSLTEPKPQSFFEHASSLIHQEEDDIMEITSPPSISGQDEDREFSDNFGFFRGFTESN
TSNLFDVQTSTVDMNAIYNL*
Nucleotide sequence
Length: 3,368
>Haaura.CG.MTP2014.S1110.g07625.01.t
ATGGGGAGCGCTTTCAGTTTTTGCTCTGAATTCCATTCCAGGAGTCATGCGACGACTGAG
CAAGAACTGCTCGTTATTCGTAACCATCCTAACCGAATTCGCCGTCGATCTTCAGTGGCC
CCGAACGCCCCAAGGATCCGAGAGAATAAAATTCTAGAAGATCTGTGTGAGATGTCTGGC
ATAGAACCCGACGTCCCTCCAGATAGGATGCGCTCGCCAGATTTAGCTAATTTAGTCAGG
CGATTGTCAAGGTTCAACAGCACTGCTGGACAACAGAAGCGTCTTTCAACTGCTGATAAA
ACTGAACGTAGCGAAACAAGGAGCTCGCAGAATGAATTGCAGAAACCACCATATCCAGGC
GTAGCAGTTTTTGTAGCATCAGAATATATTTTGCCTTCTTGAGAAAACTAGTTCAAAGCA
GTGCTATGATCTTGCGAGTTGAGACGTCGTCCAGCCCTATTCTTGCCAAAGCATCTAACT
TCAATCGAGTCTCTGCGTTGGATAAATGGAAAACTGACTGGTTTCACGAGATAAGCAATT
TATTCACTGTGACTACTGACCAAGTTATAGGATGCAACGAAACCTGTCTCACGACACACT
GTCATACTAGTGAAAGAAACAAATATCATTGCCGAATGCTCCAAAATCGCGCAAAACTTA
ATATGGTTGTCTCGATGGTGGAACGTTACGTAAAAGGAACCCTGTCGGTAGAAACAACGG
AAAGGGACAGTAAGGTACAAACTGACGATATGAAACGTAATATGTGCGATGGTACGAAAA
TTACACCGTGGACGATGGTGAATCCAGATGAGGTATGTCCACGGAACAACGGTGATGAGA
CCAGGATTAATAAATATGCAAAGAAAAAATTTACCGCTGAAGAAATTGTGGATGACTTAT
CAATCGGAACCGACCTCTTCAGTTTAAACGATTTTGATGGCACATGCGAAACCGACATAA
GTAATGCACTATCTGGGCCTTGCGATATACCCGATGACATTCTCGCGCAGGCCTGCGAAG
TCATCAATAAAACGCAACATACACCAACGACGCTAGAGTGCAAAGACGAGAAAACAGACT
CACCAATAGGATTCTCCACGACACCGGAAATAACAAATATTCAGGAATTAAATTCTACAG
AACACACACAAACCGAAAAAATATTGCTTGATTCAGGTTATACAGAAAGTGTCATCACAC
CTGTAGTAAAAGTTAATGGCGAAAGTCTATCTGAAAATCATGAAACTACCAATAAGTTGC
AAACACAAGTGCACAGTGCAAACATAAGTGTTCCGAAGAAAATAATCCAGCGATGTACCA
CACAACCCACTGTTACTGCCAGAGGTCAGGTTTACCTCTTATCACCTTCCTCAAGACATT
CCAGTGATTCCAAGACACCCATTCCTCAGCTATCTTTAATTTCCAATGTAAAAAAGGAAA
TTAAACCTGCGCAAACGAGCAACGTAGTTGATATCGTACCCGCGACGTTACCTGATGGAA
GAGTTGTACATTTGGAGGTGACTCGCAAGATGCCTTCTACGCGACCTGCAGTGCTTCCAG
CAATCGGTCTCAAGCATATATTCATTCCCAAAAACTCCATTAACAATGTTCACCAAAACC
CAAGAAAGATCAGCAGAATCATCAGGACATCTAAAGACCAAGCGTTTTCTCAACTCAATG
CGAGGATATCTTTATCAACTAATTCGCAAAATCGAACAAAGCAAATCCGGGCGGAAAGTC
CCAACGGTGCAGTTCAAACCATATGCCTGAAAAAGGTAACAAGTCTAGCTCCGCCTAGAA
TATCAGCAGGAAATCTTGCTGGTCGAGTAGTTCATCTTACCACTGTGACCCCTGAACTCT
ATCGTCGTCTACAAAAATCGAACGGAAAAATCACAATACAGAAAGCAGTGTTTAACCAGG
GAAAAGGAGCATCTTCTACCACAACGGGTATTGCCAACACCCTACCGAAAAATATCAGAA
AAAGGACTCATGAGGGCGAAATAAAAGCTGAAATTGATTGCAATATCATTGAGACTAACG
ACAACGTGAATCAAAATGTCAATACCACCATACAAGCCAACAAAAATAAAGACTCAGATT
TAAACACTGACATTCTCGAGGAACTCATGAATGATTTGTCGTCTCCACAAGCAAGCGAAG
TAAACTCAGTAGGAAGCAACGAAGAGGCCTTCTTCGATCAATTGAACATTGACGATCTTA
TGTCAAATGTCACTCCATCTTCTCACAAGAATGCAGATGACCTTTCGGCAAAAAACACCG
TCCTAGTCGTAGAATCGGATCACGCTTACAATGTCGCTGCAGCTGACAATACCACACTGA
CAGGAAATGAGACGATCCCACCGTATATCAACGGAACTTCTCGGCTTGTAAAAAACTTGA
TGTATTCACAAGAAAGACTCCCAAAACATTGTAGCACAATGCTATCTTCACATGGTGTCG
ACACAAAGAGAAAGATTTTATGCCCCATCAACGGAAATACGAGATACGCATCGGATAATT
CAATAATGAGAATTAAGAGCGAAGTATCCGACTTTAAAATCAAAAGGAAGTATACCAAAA
GAAACGAAGCGAAGACCAGTAAAGCGGACGAAAAAACGACCACTTCTCTGGGACCTACAG
CAACTGCCGCGGCAAAAAATCCATACATTAAGCCACCGCTCCCTTACAATATATTGATAT
ACCTTGCATTCCGGGACGTAGGATTTGAATCCTTGACAGTGAAGCAAATATATCGCTTCA
TTCTTGATACCTTTCCGTACTTCAGGCACGCTCATCCAACTTGGCAGAATGCCATCAGGC
ACCAGCTCTGCTGTTGTAAAGTATACGAAAAAGTTCCTTTGATCGAGGGAGAGATGAGGA
ATGACAAACCTTCCGGTAAATCGGCGTGGAAAGTTCTCGATGAAGACGGCGAGAGAAAGC
TTGAAGAAGACGCGGCAGTCTCGCTGCAAAAGAAGGACGTTATTGGGAAAATCAAAGAAG
CTCTTTGCGATCCAAGTATATTTTCTGAACTTTTTGATGACGTGCTAACGGCATATGCGG
AGAGAAAAAGAAGAATAAGCGTGAGGGCACGCGAAAAGCAATCCATCTTACAGAGCAGTG
GCGAGTATGACACTTCGCTTACGGAACCTAAGCCTCAATCTTTTTTCGAACACGCAAGTT
CACTTATTCATCAAGAGGAGGATGATATTATGGAAATTACTTCACCTCCATCAATTAGTG
GCCAAGATGAGGACAGGGAATTCTCTGACAATTTTGGCTTCTTCCGTGGTTTTACTGAAA
GCAATACCTCTAACTTATTTGACGTACAAACTAGCACTGTGGATATGAATGCAATCTATA
ATTTGTAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[737-850] 1.6E-19 |
| SMART |
Fork_head_dom (IPR001766) - T[747-843] 2.9E-18 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[748-839] 5.44E-20 |
| Pfam |
Fork_head_dom (IPR001766) - T[749-838] 4.8E-17 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[749-850] 20.76 |
| PRINTS |
Fork_head_dom (IPR001766) - T[749-762] 6.7E-11 - T[770-787] 6.7E-11 - T[793-810] 6.7E-11 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[793-799] . |
| Protein Name | Identity | Bit Score | e-value |
|---|