- Transcript 'KH2012:KH.C3.502.v6....' >
- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1130.g07685.01.t
Possible name(s)
CLPB; KIDINS220; TOR1B
Gene model
Location
S1130 [8,161 / 9,724]
Amino acid sequence
Length: 521
>Haaura.CG.MTP2014.S1130.g07685.01.p
HPYGWTPLMCAAIRGDLEAIHALIKSGADPDLGDHYTTSRRTARSMRVHELDVLRERDLF
SDKLSPHSNFKGFTALHYAVIQDSSEAVKALLDGDADPLATNHLGHKASEYVSEENDALY
NLLFRYEEERAAKKKEAEIRERLRYPLEQRIKEHIIGQEGPIATVSSCIRRKQNGWYDEQ
HPLVFLFLGSSGVGKTELAKQVANYLHQGDKTGFIRLDMSEYQEKHEVAKLIGAPPGYIG
HDQGGQLTKKLLAKPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGQGRTIECKDAIFV
MTSNLASDEIAQYGARLRQEAAETKRNRLEGDSNEQNVRVADKVDVSHTFKENVVRPILK
RHFGRDEFLGRINEFVYFLPFSDEELMQLVEKELVMWKEIAFKKHSVSLTWQKPFVPIIL
ADGYNIHYGARSIKYEVDRRVVSLLASAHERGMLAKDSKVHVSTPATNEELSSASDLVKA
VIQLEITSSKSNQKPVVISETDVWNWHNAAENNLKKLGSC*
Nucleotide sequence
Length: 1,563
>Haaura.CG.MTP2014.S1130.g07685.01.t
CATCCGTATGGCTGGACGCCTCTTATGTGTGCTGCAATTCGGGGTGATCTTGAGGCTATT
CATGCCTTGATAAAATCAGGGGCTGACCCCGATCTTGGCGACCATTATACGACATCTAGG
AGAACTGCACGCAGCATGCGGGTGCATGAGCTTGATGTGCTAAGAGAAAGAGACTTGTTT
TCAGATAAACTCAGTCCTCATTCTAATTTCAAAGGATTCACGGCATTGCATTATGCAGTG
ATCCAAGACTCTTCAGAAGCTGTCAAAGCACTCCTTGATGGTGACGCAGACCCTCTTGCC
ACAAACCATCTCGGACACAAAGCCAGTGAATATGTGAGCGAAGAAAATGATGCACTGTAC
AATTTATTATTCAGATACGAAGAGGAACGAGCTGCTAAAAAGAAAGAAGCAGAAATACGG
GAAAGACTCCGGTATCCTTTGGAACAGAGAATTAAAGAACATATTATTGGACAGGAAGGT
CCTATAGCAACTGTTTCATCCTGCATACGGAGGAAGCAGAACGGATGGTATGATGAGCAA
CATCCTTTGGTTTTTCTTTTCTTAGGTTCCTCTGGCGTGGGGAAAACCGAGTTAGCTAAA
CAAGTAGCCAATTATCTCCATCAGGGAGATAAAACAGGATTCATTCGTTTGGACATGTCT
GAATACCAAGAGAAACATGAAGTTGCCAAGCTGATAGGTGCCCCTCCCGGATACATAGGC
CATGATCAAGGCGGTCAGCTGACAAAAAAGTTACTGGCGAAGCCGAATGCGGTCGTTTTG
TTTGATGAAGTGGATAAGGCCCACCCTGATGTTCTAACAGTCTTATTACAATTGTTTGAC
GAAGGGCGACTGACCGATGGTCAGGGTCGTACTATCGAATGCAAAGATGCCATTTTCGTC
ATGACTTCGAACCTTGCTTCTGACGAGATTGCCCAGTATGGTGCAAGATTGAGGCAAGAG
GCTGCAGAGACAAAAAGGAACCGGCTGGAGGGCGACTCAAATGAACAGAACGTCAGAGTG
GCCGACAAAGTTGACGTCTCCCACACTTTCAAGGAGAACGTGGTTCGACCAATTTTGAAG
CGTCATTTCGGCCGTGACGAGTTTCTTGGCAGAATTAATGAATTTGTTTACTTTTTGCCC
TTTTCCGACGAAGAACTGATGCAGCTTGTTGAAAAGGAGCTGGTGATGTGGAAGGAAATT
GCTTTCAAAAAGCACAGCGTCTCTTTAACTTGGCAAAAGCCTTTCGTTCCTATAATATTA
GCAGACGGATACAACATCCATTATGGAGCCAGGTCGATAAAGTATGAAGTCGATAGGAGA
GTAGTAAGCCTGCTTGCAAGCGCTCATGAAAGGGGCATGCTAGCGAAGGACTCCAAGGTT
CATGTAAGTACGCCGGCAACGAACGAGGAGTTGAGCAGTGCCAGTGACTTGGTCAAAGCC
GTGATTCAGCTGGAGATCACTTCATCAAAGTCAAATCAAAAGCCCGTCGTAATAAGCGAA
ACCGATGTATGGAACTGGCATAATGCTGCTGAAAACAATCTGAAAAAATTAGGTTCTTGT
TAA
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[3-115] 3.97826E-15 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[3-103] 15.273 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[3-32] 1.62E-15 - T[68-116] 1.62E-15 |
| SMART |
Ankyrin_rpt (IPR002110) - T[3-32] 5.8E-6 - T[71-100] 0.0023 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[3-35] 11.915 - T[71-103] 10.553 |
| Pfam |
Ankyrin_rpt (IPR002110) - T[3-34] 2.6E-5 - T[72-102] 6.4E-5 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[146-325] 2.12E-47 - T[354-454] 2.12E-47 |
| SMART |
AAA+_ATPase (IPR003593) - T[181-327] 9.8E-10 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[184-374] 6.0E-44 |
| PRINTS |
ClpA/B (IPR001270) - T[185-203] 8.5E-33 - T[231-249] 8.5E-33 - T[260-278] 8.5E-33 - T[293-307] 8.5E-33 |
| Pfam |
Clp_ATPase_C (IPR019489) - T[382-462] 7.5E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLPB_HUMAN | 54.028 % | 542 | 0 |