- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1130.g07685.02.t
Possible name(s)
CLPB; KIDINS220; TOR1B
Gene model
Location
S1130 [8,161 / 10,096]
Amino acid sequence
Length: 645
>Haaura.CG.MTP2014.S1130.g07685.02.p
MAHRLLRQLLVSRNRFPTGILRNVLPVTASQHAGYMKHNMVQSQPPRRFVYLSSNYDKAA
GMKLYPITLLAILFTSDREDNKHSKMRNSLMHYILNGDTYSLKQVLNKIKALNSDEQHEI
LNCRHPYGWTPLMCAAIRGDLEAIHALIKSGADPDLGDHYTTSRRTARSMRVHELDVLRE
RDLFSDKLSPHSNFKGFTALHYAVIQDSSEAVKALLDGDADPLATNHLGHKASEYVSEEN
DALYNLLFRYEEERAAKKKEAEIRERLRYPLEQRIKEHIIGQEGPIATVSSCIRRKQNGW
YDEQHPLVFLFLGSSGVGKTELAKQVANYLHQGDKTGFIRLDMSEYQEKHEVAKLIGAPP
GYIGHDQGGQLTKKLLAKPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGQGRTIECKD
AIFVMTSNLASDEIAQYGARLRQEAAETKRNRLEGDSNEQNVRVADKVDVSHTFKENVVR
PILKRHFGRDEFLGRINEFVYFLPFSDEELMQLVEKELVMWKEIAFKKHSVSLTWQKPFV
PIILADGYNIHYGARSIKYEVDRRVVSLLASAHERGMLAKDSKVHVSTPATNEELSSASD
LVKAVIQLEITSSKSNQKPVVISETDVWNWHNAAENNLKKLGSC*
Nucleotide sequence
Length: 1,935
>Haaura.CG.MTP2014.S1130.g07685.02.t
ATGGCACACAGACTGCTAAGACAGTTGTTGGTGAGCCGCAACAGATTTCCTACTGGCATT
CTCAGAAATGTTTTACCTGTTACTGCATCTCAACATGCGGGGTACATGAAACATAACATG
GTCCAATCTCAACCGCCCAGGCGCTTTGTTTATTTGTCTTCGAATTATGATAAGGCAGCC
GGAATGAAACTCTACCCAATAACTTTGTTAGCCATACTTTTCACGAGTGACAGGGAAGAT
AATAAACATTCGAAAATGAGAAATTCCCTCATGCATTACATACTAAATGGAGACACATAT
TCTCTGAAACAAGTCCTGAATAAAATTAAAGCTCTGAATTCAGACGAACAACACGAAATT
CTAAACTGCAGGCATCCGTATGGCTGGACGCCTCTTATGTGTGCTGCAATTCGGGGTGAT
CTTGAGGCTATTCATGCCTTGATAAAATCAGGGGCTGACCCCGATCTTGGCGACCATTAT
ACGACATCTAGGAGAACTGCACGCAGCATGCGGGTGCATGAGCTTGATGTGCTAAGAGAA
AGAGACTTGTTTTCAGATAAACTCAGTCCTCATTCTAATTTCAAAGGATTCACGGCATTG
CATTATGCAGTGATCCAAGACTCTTCAGAAGCTGTCAAAGCACTCCTTGATGGTGACGCA
GACCCTCTTGCCACAAACCATCTCGGACACAAAGCCAGTGAATATGTGAGCGAAGAAAAT
GATGCACTGTACAATTTATTATTCAGATACGAAGAGGAACGAGCTGCTAAAAAGAAAGAA
GCAGAAATACGGGAAAGACTCCGGTATCCTTTGGAACAGAGAATTAAAGAACATATTATT
GGACAGGAAGGTCCTATAGCAACTGTTTCATCCTGCATACGGAGGAAGCAGAACGGATGG
TATGATGAGCAACATCCTTTGGTTTTTCTTTTCTTAGGTTCCTCTGGCGTGGGGAAAACC
GAGTTAGCTAAACAAGTAGCCAATTATCTCCATCAGGGAGATAAAACAGGATTCATTCGT
TTGGACATGTCTGAATACCAAGAGAAACATGAAGTTGCCAAGCTGATAGGTGCCCCTCCC
GGATACATAGGCCATGATCAAGGCGGTCAGCTGACAAAAAAGTTACTGGCGAAGCCGAAT
GCGGTCGTTTTGTTTGATGAAGTGGATAAGGCCCACCCTGATGTTCTAACAGTCTTATTA
CAATTGTTTGACGAAGGGCGACTGACCGATGGTCAGGGTCGTACTATCGAATGCAAAGAT
GCCATTTTCGTCATGACTTCGAACCTTGCTTCTGACGAGATTGCCCAGTATGGTGCAAGA
TTGAGGCAAGAGGCTGCAGAGACAAAAAGGAACCGGCTGGAGGGCGACTCAAATGAACAG
AACGTCAGAGTGGCCGACAAAGTTGACGTCTCCCACACTTTCAAGGAGAACGTGGTTCGA
CCAATTTTGAAGCGTCATTTCGGCCGTGACGAGTTTCTTGGCAGAATTAATGAATTTGTT
TACTTTTTGCCCTTTTCCGACGAAGAACTGATGCAGCTTGTTGAAAAGGAGCTGGTGATG
TGGAAGGAAATTGCTTTCAAAAAGCACAGCGTCTCTTTAACTTGGCAAAAGCCTTTCGTT
CCTATAATATTAGCAGACGGATACAACATCCATTATGGAGCCAGGTCGATAAAGTATGAA
GTCGATAGGAGAGTAGTAAGCCTGCTTGCAAGCGCTCATGAAAGGGGCATGCTAGCGAAG
GACTCCAAGGTTCATGTAAGTACGCCGGCAACGAACGAGGAGTTGAGCAGTGCCAGTGAC
TTGGTCAAAGCCGTGATTCAGCTGGAGATCACTTCATCAAAGTCAAATCAAAAGCCCGTC
GTAATAAGCGAAACCGATGTATGGAACTGGCATAATGCTGCTGAAAACAATCTGAAAAAA
TTAGGTTCTTGTTAA
| SMART |
Ankyrin_rpt (IPR002110) - T[85-114] 640.0 - T[127-156] 5.8E-6 - T[195-224] 0.0023 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[86-156] 1.36E-17 - T[192-240] 1.36E-17 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[122-239] 4.43293E-15 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[127-227] 15.273 |
| Pfam |
Ankyrin_rpt (IPR002110) - T[127-158] 3.3E-5 - T[196-226] 8.3E-5 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[127-159] 11.915 - T[195-227] 10.553 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[270-449] 3.7E-47 - T[478-578] 3.7E-47 |
| SMART |
AAA+_ATPase (IPR003593) - T[305-451] 9.8E-10 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[308-498] 9.2E-44 |
| PRINTS |
ClpA/B (IPR001270) - T[309-327] 1.8E-32 - T[355-373] 1.8E-32 - T[384-402] 1.8E-32 - T[417-431] 1.8E-32 |
| Pfam |
Clp_ATPase_C (IPR019489) - T[506-586] 1.0E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLPB_HUMAN | 53.801 % | 545 | 0 |