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- Transcript 'Haaura.CG.MTP2014.S1...' >
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- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S120.g02321.01.t
Possible name(s)
SNX18; SNX33; SNX9
Gene model
Location
S120 [64,362 / 66,425]
Amino acid sequence
Length: 554
>Haaura.CG.MTP2014.S120.g02321.01.p
WNMAQIGDKVRILYEFAGIIDNGELILNDGDVVTLTNPDVGEGWWEGQSSAGSIGLFPSQ
YGELLNAEEGKEEPSSANAFYAVVGEGPSKTKTEATEEFDDNDWDDNWPEQATYETQTSV
TSSQSPMTLSVSPEIKTTQKRGGDSPKKGTKSSSSWMGGINLFSSFTVTPGESYVLGESK
VDPSEKSLISISMTEYGPMWENSPLSFTCAISDPQKASKFSGLKSYITYNITPSHTSKTV
SRRYKHFDWLLEQLIRKYGSSLAVLQLPDKQLMGRYEEDFIEGRMNQLQGWLSRMSLHPV
ICRSEVFQHFLTSKNNEKAWKEGKRKAEHDNTIGGAFFATIEPPQERLEASVTEQNLVQY
SQFTKSLEDILRQTVTHGSEYARKCSGPLMREYQKMGQLFGSLGTTFAMDTQAHSQPLTE
AIKHTGKTYEDIGTLYQNQSKYDWNPLLDGFNEYKRIASAFPNVIANNTSAIEKQREMVK
QQEEGKYTQDDVDKARKRLETISYSVQAEMNHLQYYRCGDFAAYMKHFLEQQTIFYQTIV
GKLQETAKLYEDLQ
Nucleotide sequence
Length: 1,662
>Haaura.CG.MTP2014.S120.g02321.01.t
TGGAATATGGCACAGATCGGAGATAAGGTGCGTATACTGTACGAGTTTGCCGGCATAATA
GACAACGGTGAATTGATTTTAAATGACGGAGATGTAGTTACGTTAACGAATCCGGATGTA
GGCGAAGGTTGGTGGGAAGGCCAGTCGTCTGCTGGATCTATAGGATTATTTCCTTCCCAA
TATGGTGAATTGCTGAATGCTGAAGAAGGTAAAGAGGAACCCAGCTCAGCGAATGCCTTC
TATGCTGTTGTAGGTGAGGGTCCTTCGAAAACAAAAACCGAAGCAACTGAAGAATTTGAT
GATAATGACTGGGATGATAATTGGCCAGAACAAGCTACTTATGAAACACAGACATCTGTG
ACATCCAGCCAATCTCCAATGACGCTAAGTGTTAGTCCTGAGATCAAAACAACACAAAAA
AGGGGTGGGGACTCACCAAAGAAGGGGACCAAGTCTTCTTCCAGTTGGATGGGCGGAATC
AATCTATTTTCTTCGTTTACTGTCACACCCGGCGAATCATATGTTTTGGGAGAGAGCAAA
GTTGACCCATCAGAAAAATCGCTGATTAGCATATCGATGACTGAATACGGACCCATGTGG
GAAAACAGCCCTTTGAGTTTTACCTGCGCAATCTCAGACCCACAAAAAGCCAGTAAGTTT
TCAGGCTTAAAAAGCTACATCACATACAACATCACTCCAAGCCATACAAGCAAGACCGTA
TCACGGCGATACAAGCACTTCGACTGGCTCCTGGAACAACTTATTAGAAAGTATGGATCA
TCACTTGCGGTCTTGCAACTGCCAGACAAGCAGCTTATGGGGCGATATGAAGAGGATTTC
ATAGAGGGTCGAATGAATCAGCTGCAAGGTTGGCTTTCAAGAATGTCACTTCATCCTGTT
ATATGCCGGTCTGAAGTATTCCAACATTTCTTAACATCAAAAAACAACGAAAAAGCATGG
AAAGAGGGCAAGAGAAAGGCCGAACATGACAACACAATAGGGGGTGCTTTCTTCGCAACG
ATAGAACCTCCCCAAGAAAGGCTTGAAGCATCAGTAACCGAGCAAAATCTTGTTCAGTAT
TCGCAGTTTACCAAATCTCTAGAAGACATCTTGAGGCAAACTGTGACACATGGATCAGAA
TATGCTAGAAAATGTAGTGGTCCTCTGATGAGAGAATACCAGAAAATGGGGCAGTTGTTT
GGTTCTTTAGGGACAACTTTTGCCATGGACACACAAGCACATTCACAACCATTGACTGAG
GCAATCAAACACACTGGCAAAACGTATGAGGACATTGGTACACTTTATCAAAATCAGTCA
AAGTATGACTGGAATCCTCTACTGGATGGATTTAATGAATACAAGAGAATTGCCTCCGCC
TTTCCAAACGTCATTGCGAATAATACAAGCGCCATAGAAAAGCAAAGGGAAATGGTGAAG
CAACAAGAAGAGGGAAAGTACACACAAGATGACGTAGATAAGGCGAGAAAGCGCTTGGAG
ACTATTTCTTACTCCGTGCAGGCCGAGATGAACCACTTGCAGTATTATAGATGTGGTGAT
TTCGCTGCCTACATGAAGCATTTCCTCGAGCAACAGACGATATTCTATCAAACTATAGTT
GGCAAGTTGCAGGAGACAGCAAAACTTTATGAAGACCTCCAA
| ProSiteProfiles |
SH3_domain (IPR001452) - T[5-67] 13.138 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[7-67] 1.03E-10 |
| SMART |
SH3_domain (IPR001452) - T[8-66] 3.1E-9 |
| Pfam |
SH3_domain (IPR001452) - T[21-61] 7.6E-6 |
| PANTHER |
SNX9 (IPR028644) - T[74-547] 4.2E-121 |
| Gene3D |
PX_dom_sf (IPR036871) - T[188-321] 7.2E-39 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[203-315] 6.41E-26 |
| SMART |
Phox (IPR001683) - T[203-314] 2.1E-23 |
| ProSiteProfiles |
Phox (IPR001683) - T[207-318] 16.018 |
| Pfam |
Phox (IPR001683) - T[209-313] 4.6E-21 |
| Pfam |
Sorting_nexin_WASP-bd-dom (IPR019497) - T[317-550] 6.0E-70 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[363-553] 7.8E-64 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX33_HUMAN | 32.423 % | 324 | 3.02E-104 |
| SNX9_HUMAN | 42.469 % | 333 | 2.21E-107 |
| SNX18_HUMAN | 41.566 % | 265 | 6.01E-81 |