- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1213.g07872.01.t
Possible name(s)
CD207; CLEC4E; COLEC12
Gene model
Location
S1213 [17,645 / 18,365]
Amino acid sequence
Length: 240
>Haaura.CG.MTP2014.S1213.g07872.01.p
MIQIIWMLLPYFVTIASSASPQQLEGCYMTYDTVSSRINLNFDWIKPTGSPGIRGPVGAP
GPKGEAGSSGFAQGNILAECNAKIQQLEEKINRLTNARRLEKLHQFFVDGWKAGNNEHFY
YVSEEGMTWRQAVIFCARKKARLATVGPRDLAMFDLLWNLAPTNGHLWIGLSDIAIEGGW
KWMDGISSDSSNTLWLQGQPDNIGNDQDCGVIFEGWKGGFDDFQCLSVAPRALCEIASP*
Nucleotide sequence
Length: 720
>Haaura.CG.MTP2014.S1213.g07872.01.t
ATGATTCAAATTATCTGGATGCTTTTACCTTATTTCGTCACAATCGCATCATCTGCATCA
CCGCAACAACTGGAAGGTTGTTATATGACCTATGACACCGTTAGTTCGAGGATCAATCTT
AATTTCGACTGGATAAAACCCACCGGATCACCGGGGATACGAGGTCCCGTCGGAGCACCG
GGACCCAAAGGCGAGGCAGGGTCAAGCGGTTTTGCGCAGGGTAATATTTTAGCGGAATGC
AATGCGAAAATTCAACAACTTGAAGAAAAAATCAATCGATTGACAAATGCCAGAAGATTG
GAAAAACTTCATCAATTTTTTGTGGACGGTTGGAAAGCAGGAAACAACGAACATTTTTAT
TACGTCAGCGAAGAGGGTATGACGTGGCGACAAGCTGTGATATTTTGCGCGAGAAAAAAG
GCGAGGCTTGCTACTGTTGGGCCGCGCGACTTAGCTATGTTCGATTTGTTATGGAATTTA
GCGCCAACTAACGGACATCTTTGGATAGGTTTGAGCGATATTGCGATCGAAGGAGGTTGG
AAATGGATGGATGGAATTTCCTCTGATTCTTCAAATACACTTTGGTTGCAAGGTCAACCA
GATAACATTGGAAATGATCAGGATTGTGGAGTTATTTTTGAAGGATGGAAAGGGGGATTT
GATGACTTCCAATGTCTTTCTGTAGCTCCCAGAGCGTTATGTGAAATAGCTTCTCCCTAG
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[102-238] 4.0E-26 |
| SMART |
C-type_lectin-like (IPR001304) - T[107-235] 3.2E-14 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[109-237] 3.32E-27 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[115-225] 16.423 |
| Pfam |
C-type_lectin-like (IPR001304) - T[126-235] 5.2E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|