- Transcript 'Boleac.CG.SB_v3.S5.g...' >
- Transcript 'KH2012:KH.C7.730.v1....' >
- Transcript 'Cisavi.CG.ENS81.R30....' >
- Transcript 'KH2012:KH.C10.495.v1...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1217.g07880.02.t
Possible name(s)
CD207; CLEC10A; CLEC4M
Gene model
Location
S1217 [15,778 / 18,776]
Amino acid sequence
Length: 204
>Haaura.CG.MTP2014.S1217.g07880.02.p
MDWVQPVGVSGNPGNQGPIGPTGPRGEKGDEGPTGEIPNKILTGHETRIRDLEQKLQQLT
KIQRQEKILNLFTNGWKAGANEYFYLVSESKMNWQQAKTFCEGKEARLATVGPRDRSMFD
FLRNLAPGKYIWIGLNDISTEGRWVWIDRVNSTSLNTIWQNGQPDNQNGNQDCGLFHAHY
SKGLDDGTCSSSGSYALCELKLE*
Nucleotide sequence
Length: 612
>Haaura.CG.MTP2014.S1217.g07880.02.t
ATGGACTGGGTACAACCGGTTGGAGTCAGTGGAAACCCTGGAAATCAAGGTCCCATCGGC
CCAACCGGTCCCAGAGGTGAAAAGGGCGATGAAGGACCTACAGGAGAAATACCAAACAAA
ATTCTAACAGGACACGAAACGAGAATTAGAGATCTTGAACAAAAGCTTCAACAGTTGACA
AAGATTCAACGGCAGGAAAAAATTCTCAACCTTTTTACAAATGGATGGAAGGCGGGTGCC
AATGAATATTTTTACTTAGTTAGCGAGAGCAAAATGAACTGGCAACAGGCGAAAACATTC
TGTGAAGGAAAGGAAGCAAGGCTTGCTACAGTTGGACCACGTGATCGAAGCATGTTCGAT
TTTCTTCGAAACTTAGCGCCTGGTAAATACATTTGGATCGGTTTGAACGACATTTCGACA
GAAGGCAGATGGGTTTGGATCGACAGAGTCAATTCTACCAGTTTAAACACTATATGGCAG
AACGGACAACCAGATAATCAGAATGGAAATCAAGACTGTGGCCTGTTTCATGCGCACTAC
AGCAAAGGCCTGGACGATGGCACGTGCAGTTCTAGTGGTTCATATGCTCTCTGTGAACTG
AAATTGGAATGA
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[66-203] 7.1E-30 |
| SMART |
C-type_lectin-like (IPR001304) - T[72-199] 6.9E-17 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[73-201] 1.16E-27 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[80-195] 15.885 |
| Pfam |
C-type_lectin-like (IPR001304) - T[91-199] 4.1E-16 |
| ProSitePatterns |
C-type_lectin_CS (IPR018378) - T[173-198] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLC4K_HUMAN | 28.846 % | 76.3 | 1.53E-16 |