Login
Help

Submit your Data

  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S121.g02329.02.t

Possible name(s)

RAB11FIP1; RAB11FIP2; RAB11FIP5

Location

S121 [12,796 / 17,527]

Sequences

Amino acid sequence

Length: 442

>Haaura.CG.MTP2014.S121.g02329.02.p
MLGPTDITVIVHKAKNLLIKGKSSNDAYATMEFGKTKYATNVIESSINPEWHQECQFEMP
SGGVLDKLVVTITIFNKQHGKFGLQADDFIGQVEIPLSSIKCTDSKETTKWYNLQHRNPK
KEKKNRGQVEVSFKYLSKEKFALLPDKKSPLNLKNLKQKFRRRSEDEDSGVGYESNLRKG
QSLDNLHRTSSNSSDRSSNSKRRLSLVQSTRGLVKFPNRMDLGNNSKSVSVEVLNNPEIH
RVSSLKRSSSGNGRQDTTKQHVRNRSMPDTTLRALTSQGNDRNSPNICINGSHLYISGTD
SGNNSMNTSLECLQQNNSGLNRDTDIAELHASHNENQSNSRRATYSPESSSSNLSILYKP
KKHYRLDVKELCKVSTIHEDATVVFQNMSRDKLLELCIKQHNTIAIERKQARQLEDYIDT
LLVKVMMLKPQILDRSTCTKM*

Nucleotide sequence

Length: 1,326

>Haaura.CG.MTP2014.S121.g02329.02.t
ATGCTAGGTCCCACCGATATCACTGTCATAGTACATAAGGCAAAGAACCTTTTGATCAAA
GGTAAATCCAGCAATGATGCCTATGCCACAATGGAATTTGGTAAAACCAAATACGCCACG
AACGTCATCGAGTCTTCAATCAATCCAGAATGGCATCAAGAATGTCAGTTCGAAATGCCA
TCAGGAGGAGTGCTCGACAAACTTGTTGTCACGATAACTATCTTCAACAAGCAGCATGGG
AAATTCGGTCTTCAAGCTGATGATTTTATTGGTCAGGTTGAAATTCCACTGAGTTCCATA
AAATGCACGGATAGCAAAGAAACAACGAAATGGTATAACCTACAGCATAGAAATCCTAAA
AAAGAGAAGAAAAACCGAGGTCAAGTGGAAGTTAGCTTCAAGTACTTGAGCAAAGAGAAG
TTCGCCTTATTGCCCGATAAGAAAAGTCCTCTGAATCTGAAAAATTTGAAGCAGAAATTT
CGCCGTCGCTCAGAAGATGAAGACTCTGGAGTCGGTTATGAAAGCAATCTTCGTAAAGGG
CAATCTTTGGATAATTTACATCGCACATCGTCTAACTCCAGTGATAGATCGTCTAATTCA
AAACGAAGGCTGTCTTTGGTCCAGTCCACTAGAGGACTAGTTAAATTTCCAAATAGAATG
GATCTTGGCAACAACAGCAAGTCTGTCAGTGTAGAAGTACTCAATAATCCTGAAATTCAC
AGGGTCTCATCCCTGAAGCGTTCAAGCTCTGGGAATGGAAGACAAGACACTACAAAGCAG
CATGTAAGGAATAGATCAATGCCAGATACTACTTTGCGTGCACTGACCTCTCAAGGCAAC
GATAGAAACTCGCCAAACATATGTATAAATGGTTCGCACTTATATATTTCAGGGACAGAT
TCAGGTAACAACAGTATGAATACTTCATTGGAATGCCTGCAACAGAATAACTCTGGCTTG
AACAGGGACACAGACATCGCAGAACTGCATGCATCACATAATGAAAATCAGTCTAATTCA
AGACGTGCCACCTACTCACCGGAGTCTTCGAGTTCTAACCTGTCTATTCTGTATAAGCCA
AAAAAGCATTATAGACTTGATGTAAAAGAATTATGTAAGGTTTCTACCATTCACGAGGAT
GCCACAGTCGTTTTCCAGAATATGAGTCGCGATAAACTTCTTGAGCTTTGTATCAAGCAA
CATAACACTATTGCCATAGAGAGAAAACAAGCCAGACAACTCGAGGACTATATAGACACT
CTTCTCGTCAAAGTAATGATGCTGAAACCGCAAATATTGGATAGGTCCACTTGTACAAAG
ATGTAG

InterProScan

ProSiteProfiles
C2_dom (IPR000008) - T[1-94] 11.478
PANTHER
FIP_classI (IPR037789) - T[4-339] 4.3E-51 - T[330-436] 4.3E-51
Gene3D
C2_domain_sf (IPR035892) - T[4-135] 2.9E-26
SMART
C2_dom (IPR000008) - T[6-109] 6.4E-14
Pfam
C2_dom (IPR000008) - T[7-114] 2.0E-19
Pfam
Rab-bd_FIP-RBD (IPR019018) - T[389-433] 8.6E-7
SUPERFAMILY
FIP-RBD_C_sf (IPR037245) - T[408-435] 1.19E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RFIP1_HUMAN 34.783 % 86.3 8.45E-18
RFIP5_HUMAN 26.627 % 90.9 1.57E-19





By clicking "SEND", you accept the terms of our Privacy Policy.