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TRANSCRIPT CARD

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  1. Clone 'csma090f03' > 
  2. Clone 'cicl077i07' > 
  3. Clone 'cien50215' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S122.g02343.02.t

Possible name(s)

SLC6A1; SLC6A5; SLC6A9

Gene model

Haaura.CG.MTP2014.S122.g02343

Location

S122 [33,406 / 37,657]

Sequences

Amino acid sequence

Length: 399

>Haaura.CG.MTP2014.S122.g02343.02.p
MDTENGTAKPLVGNGSEENGDENVSSSNSSVDSTVRETWDRKLDFMLSCIGYAVGLGNIW
RFPYLCYKNGGGAFLIPYLIFLLICGIPLFFLELSFGQFGALGPVAIWKIAPLFKGVGYA
MMMISFMVCVYYNVIIAYSLHFIFNSMQSTLPWSTCDNDWNTEFCRNKKPANGTTYLAPD
WTNISCGKGEGWFNSSAKTTVVQSLNATINGSCVNFTTSAQEYFTRRVLRLTDNIDEMGS
IQWELCGFLALAWVIVFICLFKGVKWSGKIVYFTATFPYVVLLILLVRGVMEEGAMLGIK
YYLLPQFDRLFDIKVWIEAAVQIFYSLGAAYGVILSYSSLNNFKNNVYRDAITICCINCA
TSILAGLVVFTVLGSLAFQTDKNITQVVDEGCLLTLII*

Nucleotide sequence

Length: 1,197

>Haaura.CG.MTP2014.S122.g02343.02.t
ATGGACACTGAAAATGGAACAGCAAAACCTCTGGTGGGGAACGGCAGCGAAGAGAATGGA
GACGAAAACGTGTCATCAAGTAACAGCTCTGTTGACTCAACGGTTAGAGAAACGTGGGAT
CGGAAACTAGATTTTATGCTATCGTGTATTGGCTACGCGGTTGGTCTCGGTAACATTTGG
AGATTTCCTTATCTCTGTTACAAAAACGGAGGAGGCGCTTTCCTGATCCCGTACTTGATA
TTTCTCCTCATTTGTGGTATTCCTCTATTTTTTCTCGAACTATCGTTTGGACAGTTTGGA
GCCCTAGGACCGGTTGCCATATGGAAAATAGCGCCTTTATTCAAAGGCGTTGGCTATGCA
ATGATGATGATTTCTTTCATGGTGTGCGTGTACTACAACGTCATCATTGCTTACAGTCTC
CATTTTATATTCAATTCGATGCAATCCACGCTTCCGTGGAGCACCTGCGACAACGACTGG
AATACCGAGTTCTGTCGCAATAAAAAACCTGCTAATGGCACTACGTATTTGGCTCCGGAT
TGGACGAACATATCGTGTGGCAAAGGTGAAGGATGGTTCAACTCAAGTGCAAAAACGACT
GTGGTACAATCGCTGAACGCTACAATCAACGGCTCTTGCGTTAATTTTACAACGTCAGCC
CAGGAGTATTTCACACGACGTGTTCTACGACTTACAGATAATATCGATGAGATGGGAAGT
ATTCAATGGGAGCTCTGTGGTTTCTTGGCCTTGGCATGGGTCATCGTGTTTATATGCCTA
TTCAAAGGAGTGAAATGGTCCGGCAAGATCGTTTACTTCACAGCAACTTTCCCTTACGTC
GTCCTCTTAATCTTACTCGTTCGGGGCGTTATGGAAGAAGGGGCGATGCTTGGCATAAAA
TATTATCTACTGCCCCAGTTCGACCGACTCTTCGACATCAAGGTATGGATCGAAGCAGCG
GTTCAAATATTTTACTCTCTTGGCGCGGCCTACGGTGTTATTCTGTCCTATTCTTCGCTG
AATAATTTCAAAAACAACGTCTATAGGGATGCGATTACCATATGTTGTATAAACTGCGCA
ACGAGCATTCTGGCTGGCTTGGTAGTCTTCACTGTGCTCGGATCGTTAGCGTTTCAGACT
GACAAAAACATTACACAAGTCGTCGATGAAGGTTGTCTGCTTACATTGATTATATAA

InterProScan

ProSiteProfiles
Na/ntran_symport (IPR000175) - T[35-398] 66.11
PANTHER
Na/ntran_symport (IPR000175) - T[35-397] 2.1E-142
SUPERFAMILY
SNS_sf (IPR037272) - T[36-165] 1.02E-118 - T[218-394] 1.02E-118
Pfam
Na/ntran_symport (IPR000175) - T[36-397] 9.8E-135
PRINTS
Na/ntran_symport (IPR000175) - T[44-65] 4.1E-55 - T[73-92] 4.1E-55 - T[116-142] 4.1E-55 - T[270-287] 4.1E-55 - T[352-372] 4.1E-55
ProSitePatterns
Na/ntran_symport (IPR000175) - T[60-74] . - T[142-162] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SC6A7_HUMAN 49.219 % 358 7.36E-119
SC6A5_HUMAN 45.995 % 351 2.41E-114
SC6A9_HUMAN 46.457 % 360 6.97E-119