- Transcript 'KH2012:KH.C9.80.v1.A...' >
- Clone 'ma307l03' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1292.g08048.01.t
Possible name(s)
FP565260.1; PWP2; WDR5
Gene model
Location
S1292 [11,107 / 13,885]
Amino acid sequence
Length: 904
>Haaura.CG.MTP2014.S1292.g08048.01.p
MKYSFQFSNLLGTVYAKGNVEFLSGNDTLVSPVGNRATLFNLKDNNSSTLPITTKCNIAH
LAFSPDDCMAIAVDEAGEASLISLLSKTIIHRFKFRSPVTCIKYSPDGKRFAVATDRTVL
VYYSPGKTRELNPFTLNRSYHGAYDDITCIDWTSDSNAFAAGSKDMNTKVYGARKFQNLH
VYSLGGHKDEIMGCFFQEDSLDLYTVCRSGSLNVWECDTDLDQLKPAERKEVVSYSAEDP
METDDIPENDHTDGDQQLNDIDQIKPMEKVNYTRLSKYFYNKEGDFNSVTAVSFHKPKQI
IVTGFASGAFYLHELPNFNLIHSLSISEQHISTACFNKSGDWLALGCSGLGQLLVWEWQS
ETYILKQHGHFNNMTSLDYSPDGRYIVTGGEDSKVKVWDTSSGFCFVTFVEHKAPVTDVT
FTSNGYVIVSASLDGTVRAFDMHRYRNFRTFTSPKPVQFVSLAVDHSGEMVSAGSHDTFE
IYLWTMRTGHLLDILSGHEAPVTSIAFSKQDALLVSGSWDGLVKLWNVIDGKGARETLQI
GHDILAVAFNPNGKEIAVSSLNAEITIWDVQHAVQTGSIECRHDMGAGRGELDRVSSKTK
VQGKSFDTISYTADGQAIIAGGKCLNICLYSVKECLLLKRFKVSQNLSFDSVEEFLNKRK
MTEFGPSALIDMGESEQGVSIKLPGVRKGEMCARAHKPEVRVTAVRFSPSGREWAATTTE
GLLIYSLDASMVFDPFDLEVEINPETINHQLAMKEYSTAIMMAFRLNENTHISRVIESIP
ADDIDVISKGLSLVYVEKLLEFVARQLEKSRHANFYLLWCKCLLVHHSVHLKPRSNKVMH
TLNHLSKALTVKVDQLGKLCDTNKYQMEYILATSVHLSKKRQKIQQDNMEEDSNVLFESD
HEN*
Nucleotide sequence
Length: 2,712
>Haaura.CG.MTP2014.S1292.g08048.01.t
ATGAAGTACTCCTTCCAGTTTTCAAACCTACTGGGTACAGTATATGCTAAAGGGAACGTC
GAATTTCTCTCTGGTAACGATACTTTAGTCAGCCCAGTTGGCAACAGAGCTACCCTATTC
AATCTGAAAGATAATAACTCGTCCACGCTCCCGATTACGACGAAGTGCAATATTGCCCAT
TTGGCATTTTCCCCAGATGACTGCATGGCAATAGCGGTAGATGAAGCCGGTGAAGCTTCT
CTGATAAGTTTGTTGAGCAAAACAATAATTCACAGATTCAAATTTCGTAGTCCTGTCACC
TGTATTAAGTACAGTCCGGACGGGAAACGATTTGCCGTAGCCACAGACAGAACAGTACTG
GTGTATTACTCACCGGGTAAGACACGGGAACTCAACCCTTTCACGTTAAATCGTAGCTAT
CACGGTGCTTACGACGACATTACCTGCATCGACTGGACGTCAGATTCCAACGCGTTCGCG
GCAGGCAGCAAAGACATGAATACGAAGGTGTACGGAGCCAGAAAATTTCAAAATTTGCAT
GTCTATTCGTTGGGAGGTCATAAAGATGAAATAATGGGCTGTTTTTTCCAAGAAGACTCG
CTGGATCTCTATACCGTTTGTAGGAGCGGAAGCTTAAATGTTTGGGAGTGCGACACAGAT
CTCGATCAGTTGAAACCCGCCGAACGCAAAGAGGTCGTATCCTATTCTGCCGAAGACCCG
ATGGAGACAGATGATATCCCGGAGAACGACCATACCGATGGTGATCAACAGTTGAACGAT
ATCGACCAAATCAAGCCTATGGAGAAAGTGAATTATACCAGGTTGTCGAAATACTTTTAC
AACAAAGAAGGCGACTTCAATTCGGTAACGGCCGTTTCCTTTCACAAGCCAAAGCAAATT
ATAGTTACTGGTTTTGCATCCGGAGCGTTTTATTTGCATGAACTTCCAAATTTCAATCTC
ATTCATTCCTTGAGCATTTCAGAGCAACACATATCCACCGCTTGCTTCAATAAAAGTGGC
GATTGGCTAGCGTTAGGATGTTCTGGTCTAGGCCAACTCCTGGTGTGGGAATGGCAGAGT
GAAACCTATATTCTCAAACAACATGGTCATTTCAATAACATGACCAGCTTGGATTATTCA
CCAGATGGACGGTACATCGTTACCGGCGGGGAAGACAGTAAAGTGAAAGTGTGGGACACG
TCGAGCGGGTTCTGTTTCGTAACCTTCGTAGAACACAAGGCGCCCGTGACCGATGTGACT
TTTACTTCGAACGGTTATGTCATAGTGTCGGCCTCTCTCGACGGTACTGTCCGTGCTTTT
GACATGCACAGGTACAGAAATTTCAGGACATTCACGTCGCCCAAACCGGTCCAGTTTGTC
AGCCTCGCCGTGGATCACAGCGGTGAAATGGTATCTGCCGGTTCCCACGACACGTTCGAA
ATCTATCTGTGGACCATGCGGACCGGCCATCTTCTCGACATCCTCTCCGGACATGAAGCG
CCGGTCACATCCATAGCTTTCTCGAAACAAGACGCCCTGTTGGTCAGCGGTTCGTGGGAT
GGTCTGGTCAAATTATGGAACGTCATAGACGGGAAAGGAGCCAGAGAAACTTTGCAGATC
GGACACGATATACTCGCCGTCGCTTTCAATCCGAACGGTAAAGAAATCGCGGTCTCGTCT
CTGAACGCAGAGATCACGATTTGGGATGTACAGCACGCGGTTCAAACAGGGTCGATAGAG
TGCCGTCATGACATGGGAGCGGGAAGGGGTGAACTTGACAGAGTATCGTCCAAAACCAAA
GTACAAGGAAAATCGTTCGACACAATTTCCTATACAGCTGATGGACAAGCTATTATTGCA
GGAGGGAAATGTCTCAACATATGCTTGTATAGCGTCAAAGAGTGTCTGCTTCTGAAGAGA
TTTAAAGTCTCTCAAAATCTGTCTTTCGACTCCGTAGAAGAATTTCTGAACAAGAGAAAA
ATGACCGAGTTCGGTCCGTCTGCTTTGATCGACATGGGCGAGTCGGAGCAAGGGGTGTCG
ATCAAGTTACCCGGAGTTAGGAAGGGTGAAATGTGTGCTCGAGCTCACAAACCGGAGGTT
CGGGTCACTGCCGTCAGATTTTCACCGTCCGGACGCGAATGGGCGGCCACGACCACCGAA
GGTTTGTTAATTTATTCCCTCGACGCCAGCATGGTTTTTGATCCTTTCGATTTGGAAGTC
GAGATCAATCCAGAAACGATAAATCATCAACTTGCTATGAAGGAATATAGCACAGCTATC
ATGATGGCTTTCCGGCTTAATGAAAATACTCACATCTCCAGAGTAATCGAGAGCATTCCC
GCCGACGATATAGACGTGATAAGCAAAGGTTTATCGCTGGTATATGTCGAAAAATTACTA
GAATTTGTTGCTCGCCAATTGGAAAAGTCTCGGCATGCAAATTTTTATCTGCTGTGGTGC
AAATGCTTGCTCGTACATCACAGTGTTCACTTGAAGCCCAGATCGAACAAAGTCATGCAC
ACGCTCAATCATCTGTCTAAAGCGTTGACCGTAAAAGTGGACCAACTCGGTAAACTTTGC
GATACAAATAAATATCAGATGGAGTATATACTGGCTACCTCCGTGCACTTGTCCAAAAAA
CGACAGAAAATTCAGCAGGATAACATGGAAGAGGATTCTAACGTTTTGTTTGAAAGCGAT
CACGAGAATTGA
| PANTHER |
PWP2 (IPR027145) - T[4-891] 0.0 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[12-251] 1.2E-23 - T[252-457] 2.8E-36 - T[459-750] 4.4E-32 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[24-230] 5.13E-31 - T[279-326] 5.13E-31 - T[283-572] 1.1E-62 |
| SMART |
WD40_repeat (IPR001680) - T[43-83] 390.0 - T[86-123] 0.0017 - T[133-172] 0.016 - T[177-216] 0.43 - T[275-314] 46.0 - T[317-357] 10.0 - T[360-399] 4.8E-8 - T[402-441] 6.7E-7 - T[444-485] 340.0 - T[488-527] 4.4E-10 - T[531-569] 0.22 - T[688-726] 62.0 |
| Pfam |
WD40_repeat (IPR001680) - T[97-122] 0.022 - T[137-170] 0.035 - T[365-399] 1.7E-7 - T[405-440] 0.01 - T[491-527] 2.3E-8 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[140-578] 44.083 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[367-408] 16.29 - T[409-450] 11.745 - T[495-536] 16.089 - T[544-578] 9.406 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[386-400] . - T[514-528] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[386-400] 2.3E-5 - T[428-442] 2.3E-5 - T[514-528] 2.3E-5 |
| SUPERFAMILY |
Quino_amine_DH_bsu (IPR011044) - T[539-648] 2.9E-7 - T[678-729] 2.9E-7 |
| Pfam |
SSU_processome_Utp12 (IPR007148) - T[767-871] 3.9E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 27.723 % | 106 | 6.26E-25 |
| GBB2_HUMAN | 29.282 % | 105 | 2.09E-24 |
| PWP2_HUMAN | 52.994 % | 1007 | 0 |