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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S132.g02460.01.t

Possible name(s)

KHDRBS2; KHDRBS3; QKI

Gene model

Haaura.CG.MTP2014.S132.g02460

Location

S132 [53,371 / 64,879]

Sequences

Amino acid sequence

Length: 287

>Haaura.CG.MTP2014.S132.g02460.01.p
MWKGYWMRMTEFISKLPLSRDVLQNVEIVKVRSVLFQNGDKQPLDLPTAQGPTITLTEKI
YVPVKEHPDYNFVGRILGPRGLTAKQLEQETKCKIMVRGKGSMRDKKKEEMNRGKPNWEH
LNDELHVLITVEDTDNRARLKMKRATDEIKKLLVPAEGEDDLKKKQLMELAIINGTYRDF
SSQSAKACQPRLISAPPILSMPGMRSPTPGQPPAGVLSTPVITRLPNGQTVISNGAGPPP
PLLSPPDGALYYTPLEYPYAGLMAQGASLLEYTFPDPNLIGTSLYF*

Nucleotide sequence

Length: 861

>Haaura.CG.MTP2014.S132.g02460.01.t
ATGTGGAAAGGTTATTGGATGAGGATGACCGAGTTTATCTCTAAATTACCACTCTCGCGA
GATGTGCTACAAAACGTAGAAATTGTGAAAGTTCGATCAGTGTTGTTCCAAAACGGAGAC
AAGCAGCCTCTAGATCTGCCTACGGCTCAAGGACCGACCATAACGCTTACAGAGAAGATC
TACGTTCCGGTAAAGGAACATCCAGACTACAATTTTGTGGGAAGAATTCTCGGCCCTCGA
GGACTGACCGCGAAGCAACTGGAGCAGGAAACAAAGTGTAAAATAATGGTTCGAGGAAAG
GGATCGATGAGAGACAAGAAAAAGGAGGAAATGAACAGAGGAAAACCAAACTGGGAGCAT
CTGAACGATGAACTGCACGTCCTGATAACAGTGGAAGACACAGATAATCGTGCAAGACTC
AAAATGAAAAGGGCTACTGATGAGATCAAAAAATTGCTCGTTCCAGCTGAAGGTGAAGAT
GACCTGAAGAAGAAGCAGCTAATGGAATTGGCCATAATTAATGGAACCTACAGAGATTTC
TCAAGTCAGTCAGCGAAAGCATGCCAGCCCAGATTGATATCGGCTCCACCGATCTTATCC
ATGCCCGGTATGAGATCACCTACACCGGGACAACCGCCTGCAGGTGTTCTCTCGACACCT
GTAATTACAAGACTTCCAAATGGACAGACTGTGATTTCTAATGGTGCTGGCCCGCCACCA
CCCCTGCTGTCACCCCCTGATGGTGCCTTGTATTACACGCCGCTGGAATATCCTTATGCA
GGACTCATGGCCCAGGGAGCGTCTTTACTAGAATATACTTTCCCAGACCCCAATCTCATA
GGTACGTCTCTATATTTCTAA

InterProScan

Gene3D
KH_dom_type_1_sf (IPR036612) - T[7-186] 3.4E-67
PANTHER
GLD-1 (IPR031119) - T[23-188] 6.4E-87
SMART
KH_dom (IPR004087) - T[54-154] 3.4E-9
SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[56-178] 1.28E-32
Pfam
KH_dom_type_1 (IPR004088) - T[58-108] 3.2E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KHDR3_HUMAN 38.095 % 119 1.18E-31
KHDR2_HUMAN 43.421 % 122 9.62E-33
QKI_HUMAN 55.036 % 269 1.51E-89