Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S134.g02482.01.t

Possible name(s)

FDPS; GGPS1

Gene model

Haaura.CG.MTP2014.S134.g02482

Location

S134 [53,044 / 56,340]

Sequences

Amino acid sequence

Length: 358

>Haaura.CG.MTP2014.S134.g02482.01.p
MDPNVLSDSKQVWNMFDKHFDVIVKELTSVPPSLSKADKSINWSYERIRELLSYNARSGK
RMRGITVVQSYIDILGKEKITKEGFECALSIGWAVEILQASFLVADDVMDQSPMRRGRPA
WYKLEGIGLQAVNDGMILESCVYLIVTRHCRKYPYYADLVDLFRDVTMYTQLGQSLDMET
SEKPDVDFTIFTDERYNTIIKYKTSFYSFYLPVAISFYLTGCSEVETLTEGRSILTEMGI
YFQIQDDYLDAFGDPEVTGKIGTDIESNKCTWLIVNALKLCTQEQRDILQNNYGQKDPSK
KAAVIQIFKDLELPGHYKKYEEETNSRLCRLIEGFSHPNVPKSVFMTLLNRIYQRKK*

Nucleotide sequence

Length: 1,227

>Haaura.CG.MTP2014.S134.g02482.01.t
TTGTATATAGATTTAAATGTGTATTGTATATGTGTACAACGTGTTGTATCCACATTTCCT
ACGCTAATGCTGTCCAGTTCCCTGTATGTACGATTGCAATATTTGAAGAATCGTTACCAG
CCCAATTGTAAGTAATATAATATAATATATAAAATGGACCCAAATGTGTTATCTGATAGC
AAGCAGGTCTGGAATATGTTTGATAAGCACTTCGACGTCATTGTCAAGGAACTGACGTCA
GTGCCGCCATCATTATCGAAAGCTGACAAAAGTATAAATTGGAGTTATGAAAGAATTCGG
GAATTACTGAGCTATAACGCTCGTTCTGGAAAGAGAATGAGAGGAATCACCGTTGTCCAG
AGCTACATAGACATTCTTGGAAAAGAGAAAATCACAAAGGAAGGTTTTGAATGTGCTCTG
AGCATTGGATGGGCTGTTGAAATTCTTCAAGCATCCTTTCTCGTTGCCGATGACGTGATG
GATCAATCACCGATGAGGCGGGGCAGACCAGCTTGGTATAAACTCGAAGGTATCGGTTTG
CAGGCTGTCAATGACGGAATGATTCTGGAATCATGCGTTTACCTCATTGTCACAAGACAC
TGTCGAAAGTACCCTTACTATGCAGACCTTGTGGATCTCTTCAGAGACGTTACCATGTAC
ACACAGTTGGGACAGAGTCTTGACATGGAGACTTCGGAGAAGCCTGATGTCGATTTCACA
ATTTTTACAGACGAAAGATACAACACTATTATTAAATACAAAACATCATTTTATTCCTTC
TATCTACCAGTTGCAATAAGCTTTTACTTGACAGGCTGCTCTGAAGTGGAAACTCTCACA
GAGGGTCGCTCCATATTAACGGAAATGGGAATTTATTTTCAGATTCAGGATGATTACTTG
GATGCATTCGGTGATCCAGAAGTAACAGGAAAGATTGGAACAGATATTGAATCAAACAAA
TGCACATGGTTAATTGTTAATGCTTTGAAGCTATGCACACAAGAACAAAGAGATATATTA
CAGAACAACTATGGTCAAAAAGACCCCTCAAAAAAAGCTGCAGTCATACAAATATTCAAG
GATCTTGAGTTGCCTGGACACTACAAAAAATATGAGGAGGAAACTAACTCTCGATTGTGT
CGCCTGATCGAGGGTTTCAGCCATCCAAATGTGCCGAAAAGCGTGTTCATGACACTTTTA
AATAGGATTTATCAAAGAAAAAAATGA

InterProScan

Gene3D	Isoprenoid_synthase_dom_sf (IPR008949) - T[7-357] 1.5E-100
SUPERFAMILY	Isoprenoid_synthase_dom_sf (IPR008949) - T[12-356] 1.42E-82
Pfam	Polyprenyl_synt (IPR000092) - T[47-310] 5.2E-80
ProSitePatterns	Polyprenyl_synt_CS (IPR033749) - T[103-117] . - T[238-250] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FPPS_HUMAN	45.322 %	321	1.3E-107